Vibrio breoganii: A6E01_08875
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Entry
A6E01_08875 CDS
T04649
Name
(GenBank) RNA pseudouridine synthase
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
vbr
Vibrio breoganii
Brite
KEGG Orthology (KO) [BR:
vbr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vbr03009
]
A6E01_08875
Enzymes [BR:
vbr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
A6E01_08875
Ribosome biogenesis [BR:
vbr03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
A6E01_08875
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
DUF3603
TGS
Orexin
Motif
Other DBs
NCBI-ProteinID:
ANO33321
UniProt:
A0A193KD28
LinkDB
All DBs
Position
1:complement(1923428..1924372)
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AA seq
314 aa
AA seq
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MSEIRTQVQFVDIDSDMAGQRIDNFLRNQLKAIPKSMVYRIVRKGEVRVNKKRVKAEYKL
QAGDIVRIPPVTLPATEEAPALSTKLNKVSELEHCILYEDEHVLILNKPSGTAVHGGSGL
KFGAIEALRALRPEARFLELVHRIDRDTSGILLIAKKRSALRHLQAQFREKTVQKYYFAL
VMGEWKSSIRKVTAPLLKNEVNSIVRVNPNGKASETRFKIIEKLNNATLLQASPITGRTH
QIRVHTQYVGHPIAWDDRYGDRRFDAFTGKVGLDRLFLHAANIKFIHPGTEKEMDISAPM
ENKLQRAIEGLRVK
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaaattagaacccaagtacagtttgttgacatagattccgacatggctggacag
cgcattgataactttttgcgcaatcaattgaaggcgatccctaagagcatggtttaccga
atcgtgcgtaagggagaagtccgtgtaaataaaaagcgtgttaaagcagaatacaagctg
caagcgggtgatatcgtcaggatcccacctgtaaccttgcctgctaccgaagaagcgccg
gcccttagcactaagctgaataaggtgtcagagctcgaacactgcattttgtatgaagat
gagcatgtgctgattcttaacaagccatcgggcaccgcggttcatggcggcagtggcctg
aagtttggcgctattgaagccttgcgagcgcttagaccagaagcgagatttttagagttg
gtgcatcgcattgatagagatacctctggaatcctattaatcgctaagaagcgttcggca
ttgcgtcatctacaagctcaatttcgtgagaagactgtacagaagtactatttcgcgtta
gtgatgggtgagtggaagagcagcattcgtaaagtaactgcgccacttctcaagaatgaa
gtgaacagcattgtgcgtgtaaacccgaacggcaaggcgtcagaaactcgctttaagata
attgaaaagctcaacaatgcgactttgctacaggcgagccctatcaccgggcgtacgcat
cagattcgtgtacacactcaatatgtaggtcatccaattgcatgggatgatcgctatggt
gaccgccgttttgatgctttcactgggaaggtgggtcttgaccgtcttttcttacatgcg
gcaaatattaaatttatccatccaggtacagaaaaggaaatggacatttctgcaccaatg
gaaaataaactgcaacgtgctatcgaagggctacgtgttaagtag
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