Vibrio campbellii ATCC BAA-1116: M892_09235
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Entry
M892_09235 CDS
T02837
Name
(GenBank) primosome assembly protein PriA
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
vca
Vibrio campbellii ATCC BAA-1116
Pathway
vca03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vca00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
M892_09235
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vca03400
]
M892_09235
Enzymes [BR:
vca01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
M892_09235
DNA repair and recombination proteins [BR:
vca03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
M892_09235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Helicase_C
PriA_CRR
PriA-like_WH
AAA_30
AAA_19
zinc-ribbons_6
cobW
TrwB_AAD_bind
TrmB
zf-CHY
HypA
Motif
Other DBs
NCBI-ProteinID:
AGU94788
LinkDB
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Position
I:2006507..2008708
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AA seq
733 aa
AA seq
DB search
MRPSIARVALPVPLDKQFDYVIPSHLFPVIGGRVSVPFGRQTLVGIVTAMVNHSDFPKEQ
LKAIKAVLDAQPVWPEKLYSLLTWCSQFYQYPLGDTLHNAMPAALRKGKPADFATLQEWQ
ITASGKDKLMQGLGRAVKQQRALQMLVNGSVPHQEFIDQDIGSTVLKSLEEKGWVELIEK
KPTITKWGQQVEFDVEKPKLNHEQALAIASVNSQTGFACYLLEGVTGSGKTEVYLNLIKP
VLEQGKQALVLVPEIGLTPQTINRFKRRFNVPVDVIHSGLNDTERLNAWLSARDKAAGII
IGTRSALLTPFADLGIIIVDEEHDSSYKQQDSLRYHARDVAVMRAHKEQVPIVLGSATPA
LETLHNALTGKYHHLTLTQRAGSAVPTTNKVLDVKGLYLDSGLSAPLIAEMRKHLKAGNQ
VMLFLNRRGFSPALMCHECGWIAECKRCDAYYTFHQYSNEIRCHHCGSQQPVINQCQGCG
STQLVTVGVGTEQLELQLAELFPEYKAIRIDRDSTRRKGSLEDALESIRKGEYQILIGTQ
MLAKGHHFPNVTLVALLDVDGSLYSSDFRASERLAQLFIQVAGRAGRASKPGEVILQTHH
PEHSLLQALLQKDYRHFAMTALEERKLAQLPPYSFLTLFKAEANQSEVVEDFLRQVRFTL
ESHPLFDDSCMVLGPTPSPLAKRAGKYRWQLLLQTQHRSLMQKLLTSAKPAIELLPNAKK
VRWNLDIEPQDLS
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgcgtccatccatcgcccgagtagcactgccagtcccgctcgacaaacagtttgactat
gtcatacctagtcaccttttccctgtgattggcggacgcgtttctgtgccttttggtcgg
cagactttggttggcatcgtgaccgccatggtaaatcattcagactttcctaaagagcaa
ctgaaagcgattaaagcggtattagatgcccaaccagtttggccagaaaaactctattct
ttactgacttggtgcagccagttttatcagtatccacttggtgacacacttcataatgca
atgcctgctgccctgcgtaagggaaaacctgccgatttcgcgacattacaagagtggcaa
atcactgcgtcgggtaaagataagctgatgcaaggcttagggcgtgcagtcaagcaacag
cgtgctttgcagatgctggtcaatggttcagtgccacaccaagagttcatcgaccaagat
attggctctaccgtacttaagtctttggaagagaaaggctgggtcgaactcatagagaaa
aaaccgacgatcactaagtggggtcaacaagttgagtttgatgttgaaaaaccaaagctc
aaccacgaacaagctctggcgattgctagcgtaaacagccaaaccggctttgcctgctat
ttattagagggcgttacaggttccggcaaaaccgaagtttaccttaacctcattaagcca
gtacttgaacaaggtaagcaagctttggtgctcgtccctgagataggcctgacgccccaa
actattaaccgcttcaagcgtcgctttaatgtgcctgtggatgtcattcactctgggtta
aatgataccgagcgactcaacgcttggctttctgcgcgagacaaagccgctggcatcatt
attggtacgcgctctgccctactaacgccttttgctgatcttggcattatcattgtcgat
gaagaacacgactcgtcttataaacaacaagatagcctgcgctaccatgctcgtgatgtt
gcggtgatgcgtgcacataaagagcaagtgcctattgtcctcggctctgccacaccagcc
ttagaaacactgcacaatgcactaacgggcaagtaccaccatttaactctgacgcaacgc
gccggttctgccgttccgaccactaacaaggtacttgatgttaaaggcctctatctagac
agtggcttatctgcgccattgattgctgaaatgcgcaaacatctaaaagcgggcaaccaa
gtgatgctgttcttaaaccgtcgcggcttctcaccagcgttaatgtgccatgaatgcggc
tggattgcggaatgtaaacgctgtgatgcttactacaccttccaccagtacagcaatgag
attcgctgtcaccattgtggctcacagcagcctgtgattaatcagtgccaaggttgtggt
tcgactcagttggtcacggtgggtgtgggtaccgaacagcttgagttgcaactggctgag
ctcttcccagaatacaaagccattcgcattgatagagacagcacgcgccgtaaaggcagt
ttagaagatgcgctcgaatcgattcgtaaaggcgaataccaaattctgattggcacgcag
atgttagcaaaaggccaccacttcccaaatgtgacgcttgttgcgctactcgatgttgat
ggctccctctacagtagtgacttccgcgcctccgagagactggctcaactgtttattcag
gtagcaggccgcgcaggccgcgcaagcaaacccggtgaagtgatattgcaaactcaccac
ccagaacacagtttactgcaggctctactacagaaagactatcgccactttgctatgacc
gcattggaagagcgtaaactcgcccaactgccaccgtatagcttcttgaccttatttaaa
gcagaagcgaaccaaagcgaagtggtcgaagactttttacgtcaggtgcgttttaccctt
gaatcacacccattgttcgatgatagctgtatggtattgggaccgacaccttcaccactg
gctaagcgcgctggcaaatatcgatggcagcttttactgcaaactcagcatcgctcattg
atgcaaaagttattaaccagtgcgaaacctgctattgagttgttgccaaatgccaagaaa
gttcgctggaatttagacatagagccacaggatctcagctag
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