Venturia canescens: 122407097
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Entry
122407097 CDS
T09386
Name
(RefSeq) nucleolysin TIAR isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
vcan
Venturia canescens
Brite
KEGG Orthology (KO) [BR:
vcan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vcan03019
]
122407097
03041 Spliceosome [BR:
vcan03041
]
122407097
Messenger RNA biogenesis [BR:
vcan03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
122407097
Spliceosome [BR:
vcan03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
122407097
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_occluded
RRM_7
DUF4523
RRM_3
Calcipressin
Nup35_RRM
Motif
Other DBs
NCBI-GeneID:
122407097
NCBI-ProteinID:
XP_043269018
EnsemblRapid:
LOC122407097
LinkDB
All DBs
Position
2:2063096..2674093
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AA seq
448 aa
AA seq
DB search
MMSAGADELAAHPKTLYVGNLDASVSEDLLCTLFSQIGNVKGCKIIREGGSDHYAFVEFA
DHVSASASLSALNQRNFLGKEMKVNWATSPGNQPKQDTSKHYHIFVGDLSPEIETQTLRD
AFAPYGEISDCRVVRDPQTFKSKGYGFVSFVKKTEAESAICSMNGQWLGSRSIRTNWATR
KPPPPKTDTNAKPLTFDEVYNQSSPTNCTVYCGGLTNGLTEELMQKTFSPFGSIQEIRVF
KDKGYAFVRFSTKESATHAIVASHNTDINGQTVKCSWGKESGDPNNAQQSGQAISSATYP
YYAAAAAAAAAAAAGVGGVGSVGGVGGAGQLGYWYPPQSYPTTAATQMQAGGFLQGMQGY
TYGQFAGYQQAQYMGMGMGVHAASTAAGWGQGLPGGPQLPPHHATTVSAPPGVQAAPPPP
PPPAQMMAYPMQQFQLADEDWLTPSLLV
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgatgtccgctggcgcggatgagctcgcggctcatccgaagactctatacgtcggtaat
ttggacgcgagtgtttcagaggatcttttgtgcacgctcttctcccagatcgggaatgtc
aagggctgcaagatcatcagagagggtggaagcgatcactatgcgttcgtcgaattcgcc
gatcacgtgagtgcttcagcgtcgctgtcagccctcaatcagagaaacttcttgggcaag
gagatgaaagtcaactgggcgacgtcaccgggtaatcagccaaagcaggacacgagcaag
cactatcacatattcgtgggagacctgagcccggagatcgagacgcagactctgagggac
gctttcgctccgtacggcgaaatctcagactgcagagtcgtcagagatccacagaccttc
aaatccaaaggatatggattcgtgtcgttcgtcaaaaagacggaagcggaaagtgcaatc
tgcagtatgaacggccaatggctaggtagcagaagcatccgaacgaattgggcgacccgc
aaaccaccaccaccgaaaaccgacacgaacgcgaagccactgactttcgacgaagtttac
aatcagagcagtccgacaaactgcaccgtatactgtggtggtttgacaaacggccttacg
gaagagctcatgcagaagaccttttcaccctttggctctatccaagagattcgagtcttc
aaagacaagggttacgcctttgtcaggttttccacgaaggaatcggcgacccacgccatc
gtcgcgtctcacaacaccgacattaacggacaaacggtcaaatgtagctggggaaaagag
agcggagacccgaacaacgcccaacaatcgggacaggcaatatcgtcggcgacgtatccg
tattacgcggcggcagcggctgccgcggccgcagcggcggctggtgtcggtggtgtcggc
agcgtgggcggtgtaggaggcgccggacaacttggttactggtatcctccccaatcgtat
ccaacgaccgcggctacgcagatgcaggcaggtggctttcttcagggaatgcagggatac
acgtacggacaatttgctggttatcagcaggctcagtacatgggaatgggcatgggcgtt
catgcggcaagtacggcagcgggatggggacaaggattacccggtgggcctcaattaccc
ccccatcacgcgacgacagtctcggcacctcctggtgtgcaagctgctccgccacctcca
cctccacctgcccaaatgatggcctatcccatgcaacaattccagctagcggatgaggac
tggctgacgcctagcctcctagtgtga
DBGET
integrated database retrieval system