KEGG   Venturia canescens: 122407097
Entry
122407097         CDS       T09386                                 
Name
(RefSeq) nucleolysin TIAR isoform X1
  KO
K13201  nucleolysin TIA-1/TIAR
Organism
vcan  Venturia canescens
Brite
KEGG Orthology (KO) [BR:vcan00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:vcan03019]
    122407097
   03041 Spliceosome [BR:vcan03041]
    122407097
Messenger RNA biogenesis [BR:vcan03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     122407097
Spliceosome [BR:vcan03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA binding proteins (RBPs)
    122407097
SSDB
Motif
Pfam: RRM_1 RRM_5 RRM_occluded RRM_7 DUF4523 RRM_3 Calcipressin Nup35_RRM
Other DBs
NCBI-GeneID: 122407097
NCBI-ProteinID: XP_043269018
EnsemblRapid: LOC122407097
LinkDB
Position
2:2063096..2674093
AA seq 448 aa
MMSAGADELAAHPKTLYVGNLDASVSEDLLCTLFSQIGNVKGCKIIREGGSDHYAFVEFA
DHVSASASLSALNQRNFLGKEMKVNWATSPGNQPKQDTSKHYHIFVGDLSPEIETQTLRD
AFAPYGEISDCRVVRDPQTFKSKGYGFVSFVKKTEAESAICSMNGQWLGSRSIRTNWATR
KPPPPKTDTNAKPLTFDEVYNQSSPTNCTVYCGGLTNGLTEELMQKTFSPFGSIQEIRVF
KDKGYAFVRFSTKESATHAIVASHNTDINGQTVKCSWGKESGDPNNAQQSGQAISSATYP
YYAAAAAAAAAAAAGVGGVGSVGGVGGAGQLGYWYPPQSYPTTAATQMQAGGFLQGMQGY
TYGQFAGYQQAQYMGMGMGVHAASTAAGWGQGLPGGPQLPPHHATTVSAPPGVQAAPPPP
PPPAQMMAYPMQQFQLADEDWLTPSLLV
NT seq 1347 nt   +upstreamnt  +downstreamnt
atgatgtccgctggcgcggatgagctcgcggctcatccgaagactctatacgtcggtaat
ttggacgcgagtgtttcagaggatcttttgtgcacgctcttctcccagatcgggaatgtc
aagggctgcaagatcatcagagagggtggaagcgatcactatgcgttcgtcgaattcgcc
gatcacgtgagtgcttcagcgtcgctgtcagccctcaatcagagaaacttcttgggcaag
gagatgaaagtcaactgggcgacgtcaccgggtaatcagccaaagcaggacacgagcaag
cactatcacatattcgtgggagacctgagcccggagatcgagacgcagactctgagggac
gctttcgctccgtacggcgaaatctcagactgcagagtcgtcagagatccacagaccttc
aaatccaaaggatatggattcgtgtcgttcgtcaaaaagacggaagcggaaagtgcaatc
tgcagtatgaacggccaatggctaggtagcagaagcatccgaacgaattgggcgacccgc
aaaccaccaccaccgaaaaccgacacgaacgcgaagccactgactttcgacgaagtttac
aatcagagcagtccgacaaactgcaccgtatactgtggtggtttgacaaacggccttacg
gaagagctcatgcagaagaccttttcaccctttggctctatccaagagattcgagtcttc
aaagacaagggttacgcctttgtcaggttttccacgaaggaatcggcgacccacgccatc
gtcgcgtctcacaacaccgacattaacggacaaacggtcaaatgtagctggggaaaagag
agcggagacccgaacaacgcccaacaatcgggacaggcaatatcgtcggcgacgtatccg
tattacgcggcggcagcggctgccgcggccgcagcggcggctggtgtcggtggtgtcggc
agcgtgggcggtgtaggaggcgccggacaacttggttactggtatcctccccaatcgtat
ccaacgaccgcggctacgcagatgcaggcaggtggctttcttcagggaatgcagggatac
acgtacggacaatttgctggttatcagcaggctcagtacatgggaatgggcatgggcgtt
catgcggcaagtacggcagcgggatggggacaaggattacccggtgggcctcaattaccc
ccccatcacgcgacgacagtctcggcacctcctggtgtgcaagctgctccgccacctcca
cctccacctgcccaaatgatggcctatcccatgcaacaattccagctagcggatgaggac
tggctgacgcctagcctcctagtgtga

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