Venturia canescens: 122414066
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Entry
122414066 CDS
T09386
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46 isoform X1
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
vcan
Venturia canescens
Pathway
vcan03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vcan00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122414066
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vcan03041
]
122414066
Enzymes [BR:
vcan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
122414066
Spliceosome [BR:
vcan03041
]
Complex A
U2 snRNP components
U2 related factors
122414066
Complex B
122414066
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RSRP
CdAMP_rec
Motif
Other DBs
NCBI-GeneID:
122414066
NCBI-ProteinID:
XP_043280841
EnsemblRapid:
LOC122414066
LinkDB
All DBs
Position
7:1407297..1411801
Genome browser
AA seq
1071 aa
AA seq
DB search
MVRSGEKERHHRRRSRSRSRSRSGTPEKKRRRSRSREREREREKTRHRERRSRSRERERP
ERRERTERHAERERKRGDSKEKRVPGSKSSRSTKERANRSRSRERKENKEKGEEELPFDH
TKLDKEAEQKRLELETQKRRERIERWRAERKKKELEATKKDGKASILANLQLPMKKWSLE
DDSDEETPVVPTVGVVKEIKEEESETKNEIEDVKDEVEEVKIVEDEDEVDPLDAFMAEVQ
EEVRKVNKVDNKGTKSANNGTAISGANQTGGVTIVTGVAKKKVQKQKGELIEQNQDGLEY
SSEEEGENLHETAAGIANKQKRELAKVDHTTTEYQSFRKSFYVEVPEIARMTPEEVDIYK
EELEGIRVKGKGCPKPIKSWAQCGVTKKELEVLKKLGYEKPTPIQCQAIPAIMSGRDLIG
IAKTGSGKTLAFLLPMFRHILDQSPLVDGDGPIALIMTPTRELCMQIGRDSKKFTKSLGL
SHVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRM
FDMGFEPQVMRIMENVRPDRQTVLFSATFPRQMEALARRILTRPVEVQVGGRSVVCKEVE
QHVVVLEEDQKFYKLLEILGHYQDKGSTIIFVDKQENADTLLKDLMKASYSCMSLHGGID
QCDRDSTMIDFKAGRTKILVATSVAARGLDVKQLVLVVNYDCPNHYEDYVHRCGRTGRAG
NKGYAYTFITPEQERYSGDILRAHELAGVVVPEPLRQLWEGYKARQAADGKKVHTGGGFS
GKGFKFDESEAALANEKKKFQKAALGLQDSDDEDIENDIDQQIESMLAPKRTVREIARPS
ATGNLSTAATTAATTVPGQPVASATDKLELARRLASKINIAKNLGAEAKGATQQAAEAIL
KGAGPTNLITVIASSLFSTNFEKLPMEFPHSAKTVAEQLAAKLNTKLNYQPREEDLVEGE
GEAGEQTFRKYEEELEINDFPQQARWRVTSKEALAQISEYSEAGLTVRGTYIATGKTPPE
GERKLYLAIESTSELAVSKAKAEVSRLIKEELIKLQASGTHAGSRARYKVL
NT seq
3216 nt
NT seq
+upstream
nt +downstream
nt
atggttcggagcggtgaaaaggagagacatcacagaaggagatcaaggtcacgatctcgt
tctcgttcgggaacacccgaaaaaaagcgtagacgttctcgtagcagagaacgcgaacgt
gaaagagaaaaaactcgccatagggaacgaaggagtagatcgagagaaagggaacgtcct
gagagaagggagagaactgaaaggcacgccgaaagagagagaaaaagaggggacagtaaa
gaaaaaagagtacctggatctaaatcctcacggtctaccaaggaaagagcaaaccgatcg
agatcaagagagcgcaaagagaacaaagaaaagggtgaggaagagttaccatttgatcat
acgaaattggacaaggaagcggagcagaagagactagagcttgagactcagaagcgtagg
gaacggattgaaaggtggcgggcggagaggaaaaaaaaagagcttgaggcaacaaaaaaa
gatggcaaagcttcgattctagcaaatttacaattgcccatgaaaaaatggtcactggag
gatgacagtgacgaggaaacaccggtcgtcccaactgtaggagtcgtcaaggaaatcaag
gaagaagagagcgagaccaagaacgaaatcgaggatgtcaaggacgaggttgaagaagtt
aaaattgtcgaggatgaggacgaagttgatcctttggacgctttcatggcagaggtccaa
gaagaagtacgaaaggtgaacaaggtcgacaacaaaggtacgaaatcggcgaacaacggt
acggcgattagtggagcgaatcaaacgggtggtgtgactatcgtcaccggcgttgcgaag
aaaaaggtacagaaacaaaagggtgaattgatagaacaaaatcaagacgggcttgagtat
tcgagcgaggaagaaggtgagaaccttcacgagactgcggctggtatagctaacaaacaa
aaacgtgagttggccaaagtcgatcataccacgacggaatatcaatcgttcaggaaatca
ttttatgtcgaagtaccggaaatagctcgtatgacgccggaagaggtcgatatctataaa
gaagagctcgaggggatcagagtcaagggtaaagggtgtccaaaaccaattaaatcttgg
gctcaatgcggcgtgacgaaaaaagaactcgaagtgttgaaaaaattgggttacgaaaag
ccgacgcctatacagtgtcaagcgataccggcgataatgtccggtagagatttgatcggt
atagccaaaaccgggagtggcaaaacattagcatttttgttaccgatgtttcgtcacata
ctcgatcagagcccattggtcgacggagacggtccaatagcgttgataatgacgcctacg
cgtgagctttgtatgcagatcggtagggattcgaaaaagtttacaaaatctttgggattg
tcgcacgtttgcgtttacggtggtaccgggatatccgaacaaatagccgaactgaaacgt
ggcgccgaaataatcgtgtgcacaccgggaagaatgatcgacatgctggcagcgaacagc
ggccgagtaacgaatcttcgtcgagtaacatacgtagttttggacgaagccgatcgcatg
tttgacatgggtttcgagcctcaggtgatgagaataatggagaacgtacgaccggatcgt
cagacagtgttgtttagcgcaacattcccgcgtcaaatggaagcactcgcacgaaggatc
ctcacgagaccggtggaggttcaagtcggtggtcgttcggtcgtttgcaaagaggttgag
cagcacgtagttgtcctcgaggaggatcagaagttctacaaattattggaaattctcggt
cattatcaggacaaaggatcgacgataatattcgttgataaacaggagaacgccgatacg
cttctgaaagacttgatgaaagcttcgtactcgtgcatgtctctgcacggtggaatcgat
cagtgcgatcgagattctacgatgatagatttcaaagccggtcgaacgaaaatcctcgtt
gctacgtcagtcgcagcgagagggctcgacgttaagcaactcgttcttgtcgtaaattac
gactgccccaatcattacgaggattacgttcatcgctgcggtagaaccggacgcgctggt
aacaaaggatacgcgtatactttcataacgcccgaacaagaacgttattccggggacata
ctccgggctcacgagttggccggcgttgtcgtgcccgagccgttgaggcagctttgggaa
ggttacaaagctcgccaggcagccgacggcaaaaaagtacacacgggtggtggattttct
ggtaaaggtttcaaattcgatgaatccgaagctgcccttgccaacgagaaaaagaaattc
caaaaagctgcgctcggccttcaagactccgatgacgaggacatcgagaacgatatcgat
caacagatcgaaagcatgctcgcaccgaaaagaaccgtccgcgaaatcgcgagaccctcg
gcgaccgggaacttgagtaccgctgccaccaccgccgctactaccgttcccggtcaaccg
gtcgctagcgccactgataaactcgaattggctcgtagattggcttctaaaataaatatt
gcgaaaaatttgggcgccgaggctaaaggcgctacgcaacaggctgccgaggctattctc
aagggcgctggccctactaatcttattacggtaatagcctcatcattattctcgacaaac
tttgaaaagctgccaatggaattccctcattcggcgaaaacggtagctgagcaactggca
gcgaagttgaatacgaaattgaattatcagccgagagaggaagatcttgtcgagggtgag
ggtgaagcgggcgagcaaacgttcagaaagtacgaggaagaattggaaataaacgatttc
ccgcagcaagcaagatggcgagttacgagcaaagaagcgctcgctcagatctcggaatat
tcggaggctggattaaccgttcgaggaacttacatagcaacgggtaaaacgccaccggaa
ggcgagagaaaattgtacctcgctatcgaatcgaccagtgaattggcagtcagtaaagcg
aaggccgaagtctcgagacttataaaagaggaacttatcaaattacaagcgtcgggcaca
cacgccggttcacgtgcgcgctacaaagttttgtaa
DBGET
integrated database retrieval system
