KEGG   Venturia canescens: 122414792
Entry
122414792         CDS       T09386                                 
Name
(RefSeq) DNA ligase 1
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
vcan  Venturia canescens
Pathway
vcan03030  DNA replication
vcan03410  Base excision repair
vcan03420  Nucleotide excision repair
vcan03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:vcan00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    122414792
   03410 Base excision repair
    122414792
   03420 Nucleotide excision repair
    122414792
   03430 Mismatch repair
    122414792
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:vcan03032]
    122414792
   03400 DNA repair and recombination proteins [BR:vcan03400]
    122414792
Enzymes [BR:vcan01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     122414792
    6.5.1.6  DNA ligase (ATP or NAD+)
     122414792
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     122414792
DNA replication proteins [BR:vcan03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    122414792
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     122414792
DNA repair and recombination proteins [BR:vcan03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     122414792
   NER (nucleotide excision repair)
    Other NER factors
     122414792
   MMR (mismatch excision repair)
    Other MMR factors
     122414792
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C mRNA_cap_enzyme DUF5406
Other DBs
NCBI-GeneID: 122414792
NCBI-ProteinID: XP_043282315
EnsemblRapid: LOC122414792
LinkDB
Position
8:complement(18493598..18498008)
AA seq 916 aa
MAQRSITSFFKKSTVNGDKNGTASESSKESKDKAASKLTDAKRKRDDGSSSSSSSSPPSK
KIVPSPKPTAKTKKPSSIKKTSSKSPKLTSKDKNNKSNEDKIDKINKDEKKNKVEEESSD
SLKNKSEKKEPSDLVQKNESAKKKTAKKRARIIQEDSSDDEGHLPLPDSPAKEQNGTSPK
NGKSQAKILSESESEDEPPKKDNVNKDKKIEEKKDEKSEEGKQSPKKVKTDSKSPKVMNN
FFAPRQQKDGKNKSTDKKNESSAYNPNSAKYHPIDDACWKRGDKVPYIALTRTLELIEET
SARLKMIEILSNYFRSLIVLSPDDLLPSVYLCLNQLAPAYEGLELGIAETTLMKAIAQCT
GRTLAQIKLDAQEAGDLGVVAEGSRSNQRMMFQPAALTVSNVYTKLKEISQMTGTASVGK
KVDRIQSLFVACRSTEARYLIRSLAGKLRIGLAEQSVLQALALACAMTPPEQEYPHEILD
ASSKMGSETFKQKYDEISLIVKTTYCECPNFDMVIPVLLKDGVKALPEKCKLTPGIPLKP
MLAHPTKGVQEVLTRFEGLEFTCEWKYDGERAQIHVAENGDVSIYSRNQENNTSKYPDII
GRLNNTRGDNVTSCILDCEAVAWEREKKQILPFQILSTRKRKDANEAEIKVQVCVFMFDL
LYFNGEPLVKEPFAKRRELLRENFKEVEGEWYFATSLDTTKMEEVQDFLEVSVKGNCEGL
MVKTLYEDATYEIAKRSRNWLKLKKDYLEGVGDTLDVVVIGGYIGKGKRTGTYGGFLLAC
YDQENEEYQSLCKIGTGFSEEDLQKYTEVLKEKVIPQAKSYYRYDNAHEPDHWFDASQVW
EIKCADLSLSPVHRAAAGIVDPEKGISLRFPRFVRVREDKNPEDATSAQQVADMYKNQEQ
IINQTSTSKVNDEDFY
NT seq 2751 nt   +upstreamnt  +downstreamnt
atggcacagcgctcgatcacatctttcttcaagaaatcgactgtaaacggggataaaaat
ggtactgcgtcagaatcgagtaaagagagcaaagataaagctgcttcaaaattgacggat
gctaaaaggaaaagggatgatggcagcagcagtagcagctcgagttctccgccatccaaa
aagattgtaccgagtcccaaaccgacagccaaaacaaaaaaaccttcttctattaagaaa
acatcatcaaagtctccgaaattaacatcaaaagataaaaacaataaatctaacgaggat
aaaatagacaaaattaataaagatgagaagaagaacaaggttgaagaagaatcatccgat
tctctaaaaaataagagcgaaaagaaagagccatcagatttagtacaaaaaaacgaatct
gcgaagaagaaaactgctaaaaaaagggccagaataattcaagaggattccagcgatgat
gaaggccacttgccgttgccagatagtccagcaaaagagcagaatggaactagccccaaa
aatggaaaatctcaagcaaaaatattgtcagaaagtgaatctgaagatgaacctccaaag
aaagataatgtcaacaaggataagaaaattgaagaaaaaaaagatgaaaagagcgaggaa
gggaaacaaagtccaaaaaaagtgaaaacggatagcaaatctcccaaagtgatgaacaat
ttttttgctccgaggcagcaaaaagatggaaagaacaaaagcacggataaaaagaacgag
agctccgcgtacaatccaaattcagcaaaatatcatccaatagatgatgcgtgctggaaa
cgaggagacaaagtaccttacattgcactcacgagaacgttagaactgattgaggaaacg
agtgctagattgaagatgattgaaatattatcaaattattttcgctccctaatagtgctg
agtcccgacgatctcttgccgagtgtgtatctgtgtcttaatcaacttgcccctgcttac
gaaggtcttgaacttggaatagcagaaacaacgttaatgaaagcgatagcacaatgcaca
ggaagaaccctggcacaaatcaaattagacgctcaagaagctggagatttgggtgtagtt
gcggagggaagtcgttcgaatcaaagaatgatgtttcagcctgcagctttaacggtttca
aacgtgtacacgaaattgaaagaaatttcccagatgacgggaactgcgtccgttggcaaa
aaagttgatagaattcaatcgcttttcgtcgcttgtcgttccacggaagcaagatatctc
attaggtctttggcaggcaagcttcgaataggattggccgaacaatcagttttgcaggct
ctcgctcttgcttgtgcaatgacgccaccggaacaagaatatccgcacgaaattttggac
gcgagtagtaaaatggggagcgaaaccttcaagcagaaatacgacgagatttcactcatc
gtgaaaactacttactgcgagtgcccgaatttcgacatggtcataccagttttgctgaaa
gacggtgtaaaagctttaccagaaaagtgcaagctcacgccaggtattccgttgaaaccc
atgctggcgcatccgacgaaaggtgtccaggaagttctgacgcggttcgagggccttgag
ttcacctgcgaatggaaatacgatggtgaacgcgctcaaattcacgttgccgagaatggc
gacgtgagcatatacagtagaaaccaggaaaataatacgagcaaatatcctgatatcatt
ggtagactgaataatacgcgaggcgataatgtcacgagttgtatattggattgcgaagcg
gtcgcttgggaacgtgagaagaaacaaatattgccattccaaattctcagcacgaggaaa
aggaaggacgctaacgaggccgagatcaaagtccaggtgtgcgttttcatgtttgatctt
ttgtatttcaatggcgagccattagtgaaagaaccattcgcaaaacggcgcgaattattg
agagaaaactttaaggaagtcgagggagaatggtacttcgcgacgagcctcgatacgacg
aagatggaggaggttcaagatttcctcgaggtttctgtgaagggtaactgcgagggtctc
atggtcaagacactgtacgaagacgcaacctacgaaatcgctaaaagatcccggaactgg
ttgaaactgaaaaaggattatttggaaggcgtcggcgatactctcgatgttgtcgttatc
ggtgggtacattggaaaaggaaagagaactggaacttacggaggatttcttctcgcttgt
tacgatcaggaaaatgaggaatatcagagtctttgtaagattggcacgggattcagtgaa
gaggatcttcagaaatacacggaagtactgaaagaaaaagttataccacaggcaaaatcg
tattacagatacgacaatgcccatgaaccggatcattggttcgacgcctctcaagtttgg
gaaatcaaatgcgcggatctctcgctgtcaccggtgcatcgagcagctgcaggaattgtt
gatccggagaagggaatatcattgaggtttccacgtttcgttcgcgttcgtgaggacaaa
aatcccgaagatgcaacgtcggctcagcaggttgcagatatgtacaagaatcaagagcaa
ataattaatcaaacttcgacgtcgaaagtcaacgacgaagacttttactaa

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