Venturia canescens: 122416885
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Entry
122416885 CDS
T09386
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 47 isoform X1
KO
K11857
ubiquitin carboxyl-terminal hydrolase 47 [EC:
3.4.19.12
]
Organism
vcan
Venturia canescens
Brite
KEGG Orthology (KO) [BR:
vcan00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
vcan01002
]
122416885
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vcan04121
]
122416885
Enzymes [BR:
vcan01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
122416885
Peptidases and inhibitors [BR:
vcan01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
122416885
Ubiquitin system [BR:
vcan04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
122416885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
USP47_C
UCH_1
Motif
Other DBs
NCBI-GeneID:
122416885
NCBI-ProteinID:
XP_043285926
EnsemblRapid:
LOC122416885
LinkDB
All DBs
Position
10:12101197..12119581
Genome browser
AA seq
1487 aa
AA seq
DB search
MVVGMAADGIIIEIWDLACGGDEPPTPVAIPQDLRVADLVQLVSTRFRHSVGTFGLLLKW
GRNKTNLMDVRNDLTIADLGVDFTTETDYKLLITEWPPSPSQSDELTMSDVDDDRSCVLL
NILDQSRGFTQEQLVLMSARLMDLFRYVSLWCKYEPGTYSLILQSGMGAKSFFRIELNEK
DSRKLNEIGVDLKSSKAMLLIDSTSKSPTDEVETEDPAPPEQHSDTKSSLPFVYKPEIIF
SPEFNPSNEEDALDSKSSDDESQRSPTSGDTGYETGKRFSREIYCRRRSRGRYEDTVAID
MLYASCLKRADKERESDRYHEIVAPKLMSTSRKKEDDEESEPNRHDETGYVGLVNQAMTC
YLNSLIQALYMTPEFRNALYNWEYTNDSDKDEAKSIPYQLQKLFLNLQTSSKNAVETTPL
TKSFGWDSTQAWQQHDIQELCRVMFDALEQKFKNTAQADLINRLYEGKMIDYVKCLECGT
EKQREDTFLDIPLPVRPFGSNVAYNSVEEALTAFVQPETLSGTNQYHCETCNKKCDAHKG
LKFAKFPYFLTLQLKRFDFDYNTFHRIKLNDEVTFPDILNLNSFIPSTSTESSCNDENSS
LNKAKSDNGSTTDSVEDDSPPCNNGIAVNENSSNDNYDDDGDEGIERSNGPSTSSCNSHN
HENEKKRDKLPPAKGPYVYELFSIMIHSGSASGGHYYAYIKDFRTGKWLCFNDQNVSTIT
YEDIQKAYGGGPTRAYYSGVYSSSSNAYMLMYRQIDPARNALPMQVSDFPEHLQELLVKT
QESEESKMLCRRLLVQEGCVIKVYCHHPVKRTLINKKLLCLESTWSEAIDKAYRAMMLDD
IIDRDQVRLVTYQESTGLILSSFEARDDEMLCSVVGRKPDTLLLEIRKKDEPFKSYPPDS
LPKYVYVIDITKNEVIQGPIVVRARLTQTVQEYKEQLGVTLNMDPKEIYLIFQPGILSTR
VVSANENTLQEEGYANATKVIVETSLGSGKITDLSNIRALITGLILINVPLPDVNEEELR
NLGIPSLDKSKQTEGPIPLTNGPPRLIVETVKNGDKLETNETSTIKINDVEETPPTPAVP
HPPTCNKRTSSPQVQQTETEDWYTPEQSNSEDSSLSYSDRTLVGEDDASEDDDYPLANID
RELPNQTSNQDSNQVKNPSEYIFKVTRDEHEPDKLLRVLYDKRIDLNTFKKLLEPYVGVP
AKYFRAMCRPHTEVESQQLQLDSCFDDGTTVCLKLGGNLRYGEFKVSLYQLDIESETEPF
RFLCDAIVWKEATVAQTKKDILADISRRFKIEIPYERCRLRRKYHKVAANVFMDDQKMKD
IRSYWPHEIIIQELPGEETVTSPTDVIIFARRLSSLEEKAGPLQEIVLSDKSVTEVREKI
SQISGIPDEHLTIASCKGSLPNDVLMMDQHQYWHSHGTEIEKCSRAFRIEDGSIIYYRDT
STVLSDISNQKVILDRHYVRKSKIVEASLGYPRRRTELGLKIYLDDM
NT seq
4464 nt
NT seq
+upstream
nt +downstream
nt
atggtggtggggatggccgctgatgggataattatcgaaatatgggatctcgcctgtggc
ggcgatgaaccaccgacaccagtcgcgataccgcaagaccttcgtgttgcggatctcgtg
caactcgtttccaccaggtttcggcattcggtcggaacatttggattgttacttaaatgg
ggaaggaacaagacgaatttgatggatgtgaggaatgatctaacgatagccgacttagga
gtggatttcactacggaaacggattacaaattgctcattactgaatggccgccttcgccg
tcgcagagcgatgaactgacaatgtcggatgtggacgacgacaggtcgtgcgttttgctt
aatatattggaccaaagcagaggttttacacaagagcaactcgtgctgatgtctgcaagg
ctcatggatctttttcgttacgtctcgttgtggtgcaaatacgaacctggaacttacagc
cttatcttacaatccggaatgggagcaaaatccttttttcggatcgagctgaacgagaaa
gactcaaggaagttgaatgaaatcggtgtcgatttgaagtcatccaaagccatgctgctc
atcgactcgacctcgaaatctccgaccgatgaagtcgaaacagaagacccagcgcctccg
gaacagcacagcgacacgaaatcttcacttcccttcgtatacaaaccagaaattattttt
tctccggaattcaatccctcgaacgaagaagatgcgctcgacagtaaatcatcagacgat
gaaagccagcggagtccgacttccggggatactggttatgaaacgggaaaaagattctct
agggaaatatattgcagaagacgttcgcgaggtcgatatgaggatactgtggcaattgat
atgctgtacgccagctgcttgaaaagggccgacaaagaaagggagtcagaccgatatcac
gaaattgtggcacctaaattgatgagcaccagccgcaagaaagaggacgacgaagaaagt
gagccaaaccgacatgacgaaactggttacgtcggtttggtcaaccaagcaatgacttgt
tatctcaacagtctcattcaagccctgtacatgacgccagaatttcgcaacgccttgtac
aattgggaatacacgaatgactcggataaggacgaggctaaaagcataccttatcaatta
caaaaactgttccttaacctgcagacgtcttcgaaaaatgccgttgagacaacaccgttg
acgaaaagctttggttgggactcgacgcaagcttggcagcagcatgacatccaggaactt
tgcagagtcatgttcgatgcacttgaacagaaatttaaaaacactgcacaagccgatcta
attaatcggctttacgaaggcaaaatgatcgattacgttaagtgtctcgaatgtggaacc
gaaaaacagcgcgaggacacttttctcgatattcctctgcctgtaagaccattcggtagc
aacgttgcgtataacagtgttgaagaagcactcaccgcctttgttcaaccggaaaccctg
tctggtacgaatcagtatcattgtgagacgtgtaacaaaaaatgcgatgcccacaaaggc
ttgaagtttgccaaatttccgtattttttgacgctacaactgaaacgtttcgattttgat
tacaacacctttcatcgtatcaagctaaatgatgaggtcactttccccgatattctcaat
ttgaattccttcattccatcaacatcgacggaatcgagttgtaacgatgagaattcgagc
ctaaataaggccaaaagcgacaatggctcaacgacggacagcgtcgaggacgattctccg
ccttgcaataacggtatagccgttaacgaaaattcatcgaacgataattacgacgacgat
ggagatgaaggaatcgagaggagcaatggaccttccacgtcaagctgcaattctcacaat
cacgaaaacgaaaagaaacgtgacaaattacctccggcaaaagggccttacgtttacgaa
ttattctccattatgattcacagcggtagcgcaagtggcggccattattacgcttacata
aaggatttcagaaccggaaagtggctttgctttaatgatcaaaatgtctcgacgattact
tacgaggacatacaaaaagcttatggcggtggaccaacgagagcatattacagtggtgtt
tacagcagcagttcaaatgcgtatatgctaatgtacaggcaaatcgatccggctcgtaat
gcattaccgatgcaggtgtcggattttccagaacatttacaggaattattagtgaaaacg
caagagtccgaggaaagtaaaatgttgtgtcgtcgattgttggtgcaagaaggatgcgtt
attaaggtttactgtcatcacccggtaaagagaactctcataaacaaaaaattgctttgt
ctcgagtcaacttggagcgaggccattgacaaggcttacagagcaatgatgctcgacgac
atcatcgatcgtgatcaagtacgtttagtcacttatcaagaaagtaccggtctcattctc
tcaagcttcgaggctcgagacgacgaaatgctgtgctcggttgttggtcgcaagccggat
actttgttgttggaaattcgtaaaaaggatgaacctttcaagtcttatccgcctgacagt
ctcccaaagtacgtttacgtcatcgatatcacgaaaaacgaagtgattcaaggtccgatc
gttgtccgagctcgcttgacccaaacagtccaggagtacaaggagcaattgggtgtgacg
ttgaacatggacccgaaggaaatttatctcatattccaacctgggatactttcgacaagg
gtcgttagtgctaatgaaaatactttgcaagaagagggttatgcaaatgctactaaagtc
attgtagagacttcactcggttctggaaaaattacggatttatcgaacattcgtgccctc
attactggtttaatattgataaacgttcctttgccggacgtgaacgaagaagagttacga
aatttaggaattccaagcttggacaaaagtaaacaaaccgaagggccgattcccttgacg
aatggtcctccaaggttgatcgttgaaacagtgaaaaacggcgacaaactggaaacgaac
gaaacgtcgacgattaaaataaacgatgtagaggaaactccaccaacaccagcggtgcca
catccaccaacttgcaacaaaagaacgtccagtccgcaggtacaacaaacggaaaccgaa
gactggtacacgccggaacaaagcaacagcgaagatagcagcttgagttacagcgatcgc
acacttgtgggagaagacgatgcgtccgaggacgacgattatccattagcaaatattgat
cgcgagcttcccaatcaaacgtcgaatcaggacagcaatcaggtcaaaaacccaagtgaa
tatattttcaaggtcacgcgtgatgagcacgagcctgataaacttctcagagttctctac
gacaaacgaatcgatttgaacacgttcaaaaaattgttagaaccatacgttggcgttcct
gcgaaatattttagagcaatgtgtcgaccacacacggaagtcgagagtcagcaattacag
ctcgattcgtgtttcgacgacggtactacggtttgtctgaaacttggaggcaatctacgt
tacggagaattcaaagtttccctttatcagttggatatcgagtcagaaacggaacctttt
agatttttgtgcgacgcgattgtttggaaagaggcgacggttgcgcaaacgaaaaaagac
attctggcagatatcagtaggagattcaaaatcgaaataccatatgagaggtgcaggttg
aggcgaaaatatcacaaagtagccgcgaatgtctttatggatgatcaaaaaatgaaagat
atccgatcctattggcctcacgaaattatcattcaagaattacccggtgaagaaaccgtc
accagtccaaccgacgttatcatatttgccaggcgattgtccagtctcgaggaaaaagcg
ggacctttacaggagatagttcttagtgacaagtccgtcaccgaagttcgcgaaaagatt
tcacaaatatccggtattcctgacgaacatctaacaatagcaagctgtaaaggctcgtta
ccaaacgacgtattgatgatggaccagcatcaatactggcacagccatgggacagaaatc
gagaaatgttcccgagctttccgtattgaagatggcagcatcatatattacagagatact
agcacagtgttgagcgacatcagcaaccagaaggtcatattggatcgtcattatgtacga
aaatcaaaaattgtagaagcatcgctgggttaccctcggagaagaaccgaactaggtctc
aagatctacttggacgacatgtga
DBGET
integrated database retrieval system
