KEGG   Venturia canescens: 122418136
Entry
122418136         CDS       T09386                                 
Name
(RefSeq) histone deacetylase HDAC1
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
vcan  Venturia canescens
Pathway
vcan03082  ATP-dependent chromatin remodeling
vcan03083  Polycomb repressive complex
vcan04213  Longevity regulating pathway - multiple species
vcan04330  Notch signaling pathway
vcan04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:vcan00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    122418136
   03083 Polycomb repressive complex
    122418136
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    122418136
   04350 TGF-beta signaling pathway
    122418136
 09150 Organismal Systems
  09149 Aging
   04213 Longevity regulating pathway - multiple species
    122418136
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:vcan03036]
    122418136
Enzymes [BR:vcan01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     122418136
Chromosome and associated proteins [BR:vcan03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     122418136
   HDAC complexes
    Sin3A-HDAC complex
     122418136
    BRAF-HDAC complex
     122418136
    REST complex
     122418136
    SHIP complex
     122418136
    MiDAC complex
     122418136
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     122418136
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    122418136
  Chromatin remodeling factors
   NuRD complex
    122418136
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 122418136
NCBI-ProteinID: XP_043288123
EnsemblRapid: LOC122418136
LinkDB
Position
11:complement(9072182..9078320)
AA seq 491 aa
MSTMTHSRKRVCYYYDSDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKAT
ADEMTKFHSDEYIRFLRSIRPDNMAEYNKQMQRFNVGEDCPVFDGLYEFCQLSAGGSVAA
AVKLNKQASEICINWGGGLHHAKKSEASGFCYVNDIVLGILELLKYHQRVLYIDIDVHHG
DGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNIPLRDGMDDESYESI
FVPIISKVMETFQPSAVVLQCGADSLTGDRLGCFNLTVRGHGKCVEFVKKYNLPFLMVGG
GGYTIRNVSRCWTYETSVALGSEIANELPYNDYFEYFGPDFKLHISPSNMANQNTIEYLE
KIKTRLFENLRMLPHAPGVQVQAIPEDGATVEDSEAEEKINPDERLPQRDLDKRIQHENE
YSDSEDEGDGGRRDNRSFKGSRKRPRLDKTQEGIDGDMKKEDDIKSEVKDEKDEKSNAMN
DEAKKDGSGNP
NT seq 1476 nt   +upstreamnt  +downstreamnt
atgtcgaccatgacgcacagtaggaaacgtgtttgttactattacgacagtgatattgga
aactattactatgggcaaggacatccgatgaagccacatcgcataaggatgacacacaat
ttgctgttgaattatggcctctacagaaaaatggaaatttatcgtcctcacaaagccacg
gccgatgaaatgacgaaattccacagcgacgagtacatcagattcttgagatcgattaga
ccagataacatggcagagtacaacaaacaaatgcagagattcaacgtcggagaagattgt
ccagtttttgatggactctacgagttttgtcaactgtcagccggtggttcggttgccgca
gctgtcaaattgaacaagcaagcctccgaaatctgcatcaactggggaggaggcttgcac
cacgcgaaaaagagcgaagcctcaggtttctgctacgtcaatgacatcgttctcgggata
ttggagctgcttaaataccaccagagagttttgtacatcgacatcgatgtgcatcacggc
gacggggtcgaggaggctttttatacaacggatcgtgtcatgaccgtttcttttcataaa
tacggcgaatattttccgggaactggagatttgcgcgacattggagccggaaagggaaag
tactacgctgtcaacattccgttgagggatggcatggatgacgagagctacgagtccatt
ttcgtaccaatcatttccaaagtcatggaaactttccaaccttccgctgtcgttctccaa
tgcggcgcggactcgttgactggcgaccggttgggatgtttcaacctgacggttcgtggc
cacggcaaatgtgtagaatttgtgaaaaaatacaatttgccatttttgatggttggcggt
ggtggttacacgatcagaaacgtttcgagatgttggacgtacgaaacttcggtcgccctc
ggctccgaaatcgccaacgaactgccctacaacgattactttgaatatttcggacctgac
ttcaaactccacatcagcccttcgaatatggcaaaccaaaacaccatagaatatttggaa
aaaattaaaacgaggttattcgaaaatttgaggatgttgccacacgcaccaggagtccaa
gtccaagcgattcccgaggatggggcaacggtcgaggactctgaagccgaggaaaaaata
aacccggatgaaagattaccacaacgagatttagacaaaaggatacaacacgaaaacgag
tacagtgatagcgaggacgagggcgacggtggtcgtcgagataatcgatctttcaagggc
tcgcgtaagcggccgagactggacaaaacgcaggaaggaatcgatggagacatgaaaaaa
gaggacgacataaaatccgaagtaaaagacgaaaaagacgaaaagtcgaacgcgatgaat
gacgaggcgaagaaagacggtagtgggaatccctga

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