Varibaculum cambriense: CYK25_003380
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Entry
CYK25_003380 CDS
T09090
Name
(GenBank) TlyA family RNA methyltransferase
KO
K06442
23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:
2.1.1.226
2.1.1.227
]
Organism
vcb
Varibaculum cambriense
Brite
KEGG Orthology (KO) [BR:
vcb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vcb03009
]
CYK25_003380
Enzymes [BR:
vcb01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.226 23S rRNA (cytidine1920-2'-O)-methyltransferase
CYK25_003380
2.1.1.227 16S rRNA (cytidine1409-2'-O)-methyltransferase
CYK25_003380
Ribosome biogenesis [BR:
vcb03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
CYK25_003380
23S rRNA modification factors
CYK25_003380
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FtsJ
S4
Methyltransf_23
Methyltransf_25
Methyltransf_11
Motif
Other DBs
NCBI-ProteinID:
WIK89236
LinkDB
All DBs
Position
749927..750763
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AA seq
278 aa
AA seq
DB search
MGRLRRLDRELVRRNLATSRAHAARLITAGRVSVDGRVMPKPASQIDPAQAVVVTDSPDE
EYASRGGYKLAGALDILGEDAPVIKGKRCLDAGASTGGFTDVLLRRGAQSVIAVDVGYGQ
LRWSLQQDPRVEVHDRTNIRYLDPQEIGEPAQLIVGDLSFISLKLVIPALVGASSLDAEY
LLMVKPQFEIGREDLGAGGVVRDPEDHFHTVLAVIAAAKENGLGLKQVAASPLPGPAGNV
EYFVYLGRGAAMPPDEEVRGLVRYAIANGPAGQEKTEN
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
gtggggaggctgcggcgactagatcgcgaattggtacggcgaaatttagcgacttcccgt
gcgcacgcagcgcggctcatcaccgctggccgcgtgagcgttgatgggcgggtaatgcct
aagccggcttcccagattgatcctgcccaagcggtagtagtaactgacagcccagatgag
gaatatgcttctcgcggtggctacaagctggccggcgccctcgatattttgggggaggac
gccccggttattaaaggtaaacgctgtctggatgccggggcttctaccggcgggttcacc
gatgtgttattgcggcggggagcgcaaagcgtaatcgcggtagatgtgggttatgggcag
ctgcgttggagcctgcagcaagacccgcgggtggaagtgcatgatcgtaccaatattcgt
tacctggatccgcaagaaatcggggaacctgcccagttaatagtgggagatttgtctttt
atctccctaaaactagtgatacctgccctggttggagcctctagtttagatgcggaatat
ctgttgatggtcaaaccccaattcgaaatcggtcgcgaagatttgggagccgggggagtg
gttcgtgaccccgaggatcatttccacacagtcctcgcagtaatcgcggccgcaaaggaa
aacgggctaggattaaaacaggtggcggcttcgccgttacccggaccggcaggaaacgta
gagtactttgtatacctgggacggggagcagctatgcctcccgacgaagaagtgcggggg
ctggtacgctacgcaattgcgaatggtcccgcagggcaagaaaaaacggaaaactaa
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