Varibaculum cambriense: CYK25_003920
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Entry
CYK25_003920 CDS
T09090
Name
(GenBank) IS3 family transposase
Organism
vcb
Varibaculum cambriense
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Gene cluster
GFIT
Motif
Pfam:
rve_2
HTH_21
rve
rve_3
DDE_Tnp_IS240
Poxv_Bcl-2-like
Arteri_nsp7a
Motif
Other DBs
NCBI-ProteinID:
WIK89326
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Position
complement(848376..849224)
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AA seq
282 aa
AA seq
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MVATLRSKYPLPVLLQVANLARSTFYYQLGQMQARDRHVKLKQAIREIFDKSHQRYGYRR
VRLQLLRDGWCVSRKLVAKLMRQLGLRSKTRKRKCYNSYRGTTSRRADNHLDRRFATEKP
NQQWVSDITEFQISGKRLYLSPVMDLCDHSILAHTLSVSPTTKVSALSLKKAFRVAGDPE
GVLVHTDQGYHYQHQSWISQLVEHQCVQSMSRKGNCYDNSVMENFFSHLKEEMFNNDSFV
SISELRAAIDEYIQWYNTERMQERLGGMTPNEYRQHALTTIG
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
gtggttgccactctcagatctaaatacccgttaccggtactgttacaggtagccaatctg
gcgcgatcaacgttctattatcagctggggcagatgcaggctcgggaccggcatgtgaag
ttgaaacaggcgattcgggagattttcgataaaagccatcagcgttatggttatcgccgt
gttcggcttcagctgctgcgtgatgggtggtgtgtgtcgcgaaagcttgttgctaagctg
atgaggcagctcggtttacgctctaaaacgaggaaacgtaagtgttacaactcttaccgc
ggtacgacgtcacgtcgggctgataatcatttagatcggcggtttgccacggaaaagccg
aatcaacagtgggtctccgatattaccgagttccagatctcggggaagcggctgtatttg
tccccggtgatggatttgtgtgatcactcgattcttgctcacactctctcggtatctcca
acaacgaaagtgtccgcgttgagcctgaaaaaggctttccgtgtagcgggtgatcctgaa
ggtgttcttgttcatactgatcagggctaccactatcagcaccagtcatggatcagtcag
ctagttgagcatcagtgcgttcaatccatgagccgtaagggcaactgttacgataactcc
gtgatggagaacttcttttctcacttgaaagaagaaatgttcaacaatgactcattcgtt
tccatcagcgagctgcgcgcagcgattgacgagtacatacagtggtacaacactgagcgt
atgcaagaacggctcggagggatgaccccaaacgaataccggcaacacgcactaaccacc
atcggatag
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