Varibaculum cambriense: CYK25_007070
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Entry
CYK25_007070 CDS
T09090
Name
(GenBank) SpaA isopeptide-forming pilin-related protein
Organism
vcb
Varibaculum cambriense
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpaA
Motif
Other DBs
NCBI-ProteinID:
WIK87969
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All DBs
Position
1526311..1530570
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AA seq
1419 aa
AA seq
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MLTAELSSAPVAAPVQLPAGANSDWAQKNAAVTINVSGGQINAHGNHTALGAGSFTTPLK
DSEGTVKATFTQPYARVNISAGTVQVNPTATETGISALNIGCRGVGNWKEDLADLGWPLT
PGCEVAISGGKVNVGSADSTLDRVGDIAAIGSGPDSANVNVKISGNAQVTAYSNGRGAAI
GGGFASGTTQVTISDNALVNALGAVNESPAIGAGGLPGHDASFAKNSRLEETSARLGKQN
QVHILGNAQVIAETDPDSLGSESATNGAIGAAANRSGQVSIADNAKVTAKVFGLRNGAVI
GSAGYIHDYVTDPFKITISGSPTVQATVQPVRAANKQRLEYGFGAAIGSGYQTKVPAQIT
LAGSPNLDLIGGQASSGVGLGFQSTGGGSTVNANLDAAANLQVTSPEGAPRTDGSAQRTY
QLAKGENMPLDTTGGKGQVLNLRFADGQADGAGNPQTLGLTTAVAKLTQNKQSVPFSLVT
PEGETVLSSALTSTLYNNLALSVPQRGNYYLKSRVTPSLFAYHGDKNAADAFIFPVNGQI
YTQDGLLWAQGYSLKYQVAGEGGTLPQAYTTARYLPPNTVIGALPAVTLPSVSDKTCAVD
HWELNDAPVAEDQLTQTKLSADTVVKAVTKCEDTVTPPQPQPEKAAFTWQLQDSQGKALS
GGQFTLTEKDGAAVNVPDSASGTFTVGDLDPAKSYVLTQTAAPQGYDLPQQTSHTVTFEK
PSQAYQAKVDGKAVSGEAFVITNAKTPLPPQPVDFNWKLQDSGKNLLPGGSFKLICGSDE
VALPAAGSASGTYSVSLNPTKGACTLTQTAAPAGYQLGDETSYEISFVEKDKPSGTWAAV
VAGKETSDVTFTNVALPKPPATTSFAWKLTDTAGKSLNGAIFTLSGGKTPLTVTSQDAAD
PGTYSASNLDPKKTYTLTETTAPAGYKADEASYQLTFVADGDTYQPQINGQDLPAAGLVI
KNVKLPTPAEIRWEVVSTADSSQYVPGTTFKVTPFNADGQTLDTAKSFTVSDATAIAGDR
DLNPNLGQYRVEVPDGSLKYQIEQLTAGADFAPKTGAQEVTFKLQKDGRYSQNVVGSGLK
FENTPVIKTAQFTWKLVDKDSKKPLSGGSFSLKDGSETVPVTENKADASFQATLNQAKTY
KLQQTAAPEGYEKYSRIYTISYEGGKAQVSVDDTGVDLTAGTLVISNTKKATEPTPDPST
DPTDDPTTDPTTPGTDPTDEPTTEPTDNPKQPIGGELTWKVVDSKGKAVAGTSFQITPLG
KDGKPNTADAVKVTDFVSGPTTFAVPKDLNGAVGAYKVRVDDVTLQYQLKQLTTAKGMKL
AEPQKLSFNKGADGKWAQTAAASPFINPADKPTTEPTDNPTSEPTDPTAEPQPGDNGGAS
NTKPSAGQNGGATEAPAGAYMTGGSSAASSSAAGPAPRH
NT seq
4260 nt
NT seq
+upstream
nt +downstream
nt
gtgcttacggcggagctttcatcggcaccggtcgcggcgccggtccagctcccggcgggc
gcaaactccgattgggcacagaaaaacgccgcggtaacgatcaacgttagcggcggacaa
atcaacgcccacgggaaccacaccgccctaggtgctggcagtttcactactccgctaaag
gattccgagggtaccgtaaaagcgactttcactcagccctatgcgcgggtaaacatttcc
gcaggcacggtgcaggttaaccccactgctacggaaaccggaatcagcgccttgaacatc
ggttgccgcggggtaggcaactggaaggaagatctcgctgacctcggctggcctctgacg
cctggctgtgaagtggcgattagcggcggaaaagtcaatgtgggatccgccgactccact
ttggatcgggtcggggatatcgcggctatcggttctggcccggacagtgccaatgtaaat
gtaaaaatctctggtaatgcccaggtgaccgcctactctaatgggcgcggcgccgcgatt
ggtgggggttttgcctccggcactacccaggtaaccatctcggataacgccctggttaac
gcgctaggggcagtcaatgaatcccccgctattggcgccggtggactccccggtcatgac
gcttcgttcgctaagaactctcgcttggaggagaccagcgcgcgcctcgggaaacaaaac
caggttcacatcttaggaaatgcgcaggtaattgcggaaactgatcccgattctttagga
agcgaatcggctacgaacggagcgatcggagctgccgctaaccgttccgggcaggtcagc
attgctgataacgctaaagtcaccgccaaagtattcgggctgcgcaatggcgccgtgatc
ggcagcgctggttatattcacgactacgtaaccgatccttttaagatcactatttccggc
tcccccaccgtgcaagctaccgtacagccagttcgggcagctaacaaacagcgtctcgaa
tacgggtttggtgccgcgattggttcgggttaccaaactaaagttcccgctcaaatcacc
ttggccggcagtccgaatctggatttgattggcggacaggccagctccggggtggggctc
ggcttccaaagtaccggtggtggcagcaccgttaacgctaacttggacgcagctgctaac
ctccaggtcacctcgcctgagggggctccccgcactgatggcagtgcgcagcgcacctat
cagctggctaagggggaaaatatgcccctggataccaccggaggcaaagggcaggtgctg
aacctgcgttttgctgatggccaggcggacggcgccggcaatccccaaactttagggctg
accactgcggtagctaaactcacccagaataaacagtcagtgcctttctcgctggttact
cccgagggcgaaaccgtactttcttctgcccttaccagcaccctttacaacaacttggcg
ctgtcggtaccccagagggggaactattacctgaaatcgcgggtaaccccctccctgttc
gcttatcacggcgataagaacgcggcggatgccttcatcttcccggttaatggtcagatt
tacactcaggacggattgctctgggcgcagggttactcgctaaagtaccaggtagctggc
gagggcggcaccctcccccaggcgtataccactgcgcgttatctacccccgaatacggta
atcggagcgctaccggcggtaaccttgccgtcggtttcggataagacttgcgcggtggat
cattgggaactcaatgatgccccggttgctgaggatcagttaacgcagacgaagctgagc
gccgataccgtggtgaaagcggtgactaagtgcgaggacacggttactcccccacagccg
cagccagaaaaagcggctttcacttggcagctgcaagattctcagggcaaagccttgagt
ggcggacagttcactttgacggaaaaagacggcgcggcagttaacgttccggattctgct
tccggcactttcaccgtcggtgacctggatccggctaagagttatgtactaactcaaacc
gcggctccccaaggttacgacttgccgcagcaaaccagccataccgtcacttttgaaaag
ccctcgcaggcataccaggcaaaagtggacggtaaggcagtaagcggtgaagcgtttgtg
attactaatgccaagactccgctgcctccccagccggtagatttcaactggaaactgcaa
gattccggtaagaacctgctgcctggtgggagcttcaaactgatttgcggctctgacgag
gtagcccttcctgctgccggtagcgcttcaggcacctatagcgtttctttaaatcccacc
aagggagcgtgtactctaacccagaccgccgcccccgcaggctaccagctgggtgacgag
acctcctatgaaattagtttcgtagagaaagataagcccagtggcacttgggccgcggtg
gttgccggtaaagaaactagcgacgttaccttcacgaacgtggcgctaccgaagcctccg
gccactacctctttcgcttggaaactcaccgacactgccggtaaaagcctcaatggggcg
atctttaccctgagtggcgggaaaactccgcttacggtgacctcgcaagatgctgccgat
ccgggtacttacagcgcttcgaatctggatccgaagaagacctacactttgaccgaaact
acggctcccgctggttataaagccgatgaggccagctatcagctcactttcgttgccgac
ggtgacacctaccaaccgcagataaacgggcaagatttgcccgctgccggtctggtcata
aagaacgttaagctacccaccccggcagagatccgttgggaagtagtttctaccgcggat
tcttcgcagtatgtaccgggaactacctttaaggtcactccctttaatgctgacggtcag
accttagataccgcgaagtctttcacggtctcggatgccaccgctatcgccggggatcgg
gatctgaatccgaatctggggcaataccgggtagaagtcccagacggttctcttaaatac
cagatagaacagctaaccgctggcgctgattttgcgcctaagacgggcgctcaggaggtc
actttcaagctgcaaaaagatggacgctacagccaaaacgtggtaggtagcggcctcaag
tttgaaaacaccccggtgattaagaccgcccagttcacttggaaactggtagataaagat
tcaaagaagcctttatcgggcggcagcttctccctgaaagatggcagtgaaaccgttccg
gtcacggagaataaggcggacgcctctttccaggccactttgaaccaggctaagacctat
aagttgcagcagaccgccgcaccggaaggttacgaaaaatatagccggatctacaccatc
agttatgagggtgggaaagcccaggtttcggtagatgacaccggggttgacctgactgct
gggacgctggtgattagcaatactaagaaggctaccgagccgacccctgatcccagcacg
gatcccacggatgatccgaccaccgatccgactacgcccggaactgatcccacagacgag
ccgaccacggagcccactgataaccctaagcaaccaattggcggggaactcacttggaaa
gtggttgattctaaaggtaaggcagtagccgggacttctttccagatcactcccctgggc
aaagatgggaagcccaataccgcggacgccgttaaggtcacggattttgtcagtggcccc
accaccttcgcggtacccaaagacctaaacggcgctgtcggtgcctataaggtgcgggtt
gatgacgtaaccttgcagtaccagctaaagcagctaacgactgccaaaggtatgaaatta
gcagaaccgcaaaagctgtcctttaataagggagcggatggtaaatgggcgcaaaccgcc
gctgcaagcccgttcattaacccggcagacaagccgactacggagcctactgataacccg
actagcgagccgactgaccccaccgctgagccccagccgggtgacaacggtggagcaagt
aatacgaagccgtcagctggccaaaacggcggagctaccgaggcaccggcaggtgcctat
atgactggcggatcttctgctgcgtccagctctgcggcggggccggcccctcgtcactga
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