Varibaculum cambriense: CYK25_008215
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Entry
CYK25_008215 CDS
T09090
Symbol
obgE
Name
(GenBank) GTPase ObgE
KO
K03979
GTPase [EC:3.6.5.-]
Organism
vcb
Varibaculum cambriense
Brite
KEGG Orthology (KO) [BR:
vcb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vcb03009
]
CYK25_008215 (obgE)
Ribosome biogenesis [BR:
vcb03009
]
Eukaryotic type
Other ribosome biogenesis factors
CYK25_008215 (obgE)
Prokaryotic type
GTPases
CYK25_008215 (obgE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP1_OBG
MMR_HSR1
DUF1967
FeoB_N
RsgA_GTPase
GTP_EFTU
Arf
FtsK_SpoIIIE
Motif
Other DBs
NCBI-ProteinID:
WIK88174
LinkDB
All DBs
Position
complement(1763517..1765037)
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AA seq
506 aa
AA seq
DB search
MASFVDRVKIDVTAGNGGNGCVSVRREKYKPLGGTDGGDGGRGGSVFLEVDPQSHTLLDY
HHLPHRKATNGTPGMGDNREGANGEDLVLPVPPGTVVKSAAGEILADLQGAGSRLEVARG
GTGGKGNAALATRKRKAPGFALLGEEGESRVLILELKSVADVGLVGFPSSGKSSLIGAIS
EAKPKIADYPFTTLVPNLGVVQAGDERFTVADVPGLIPGASQGKGLGLDFLRHIERCAVI
AHVVDCANMESERNPVDDIKALEAELAAYESDLDEVSGYVPLGERPRVIILNKMDIPDAA
DMAKLQAEELAKFGWPMYAVSAVSGRGLEALVFALADMVLRLRQAEPEREVQPLQVLRPP
AVGDSGFTVTQQKTGQGLVYQVRGEKPERWVKQTDFANDEAIGFLADRLYNLGVEAELLQ
SGAKSGDTVVIGEMEGGVIFDFEPLQSAGAELLGARGQDLRLEGSTRRTNQERREQYHQM
MDGKEAARRNLRLEAEQGLWTDPSVD
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atggccagttttgtggatcgagtaaaaatcgatgtgactgccggtaatgggggtaatggc
tgcgtcagtgtccggcgtgagaaatataaaccactgggcggaaccgatgggggcgatggc
ggccgcggcggcagcgtattcttagaggttgatccccagtcgcataccctgctcgattat
caccatttgccgcatcgtaaagccactaacggaactcccgggatgggagacaatcgggag
ggcgcgaatggtgaagacctggtactcccggtgcctcccggaacggtagttaaatctgca
gctggcgagattttggcggatctacaaggagctggctcgcgcctggaagtagcgcgcggg
ggcactggcggtaaaggcaatgccgcgctggctacccgcaagcgtaaagccccggggttt
gcgcttttaggggaagagggcgaatctcgcgtcctcattttggaattaaaatcggtggcc
gatgtggggctggttgggttcccgtcctccggtaagtcttccctaatcggagctatttcc
gaggcgaaaccgaagatcgcggattatccgttcactactttggtgccaaacctgggggta
gtacaggccggagatgaacggttcacggtagcagatgttcccggcctgataccgggagct
tcccaagggaaagggctggggctggacttcctccgccatatcgagcgttgcgcagtgatt
gcgcacgtggtggactgtgcgaatatggagtccgagcgtaacccggtcgatgatattaaa
gctctagaagccgaattggcggcctatgaaagcgatctggacgaagtttcgggatatgtg
cctttgggggaacgtccccgggtaatcattcttaataagatggatattcccgatgccgca
gatatggcaaaactacaggcggaggaactcgctaagttcggttggcccatgtatgcggtt
tccgcggttagcggtcgtggcctggaggctttagtatttgccttggcagacatggttttg
cggctgcgccaggcagagccagaacgggaagttcagcctttgcaggtgttgcgaccaccg
gcggtgggggattccggctttacggttacacagcaaaaaactgggcaaggactggtttat
caggtgcggggagaaaaacctgagcgctgggtgaagcagactgattttgccaatgatgag
gcgatcggcttcctggcagaccgactctacaacttaggggtggaagccgagctgctccaa
tcgggtgccaagagtggagacacggtagttatcggagaaatggaaggcggagtgatcttt
gactttgaacctttacaatccgccggtgccgagctgctaggcgcccgcgggcaagacctc
cggctagagggatcgacgcggcgtactaaccaggagcggcgcgagcaataccatcagatg
atggatgggaaagaagcagctcgccggaatctacgtttggaagccgagcaggggttgtgg
actgatccctccgttgactag
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