Vibrio cyclitrophicus: FAZ90_14050
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Entry
FAZ90_14050 CDS
T06393
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
vcc
Vibrio cyclitrophicus
Pathway
vcc00521
Streptomycin biosynthesis
vcc00523
Polyketide sugar unit biosynthesis
vcc00541
O-Antigen nucleotide sugar biosynthesis
vcc01100
Metabolic pathways
vcc01110
Biosynthesis of secondary metabolites
vcc01250
Biosynthesis of nucleotide sugars
Module
vcc_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
vcc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
FAZ90_14050 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
FAZ90_14050 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
FAZ90_14050 (rfbC)
Enzymes [BR:
vcc01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
FAZ90_14050 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
QCI72101
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Position
1:complement(3107148..3107717)
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AA seq
189 aa
AA seq
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MKVIDTRIPDVKIIEPNVFGDERGFFMETWNQKQFEELVTGKPTQFVQDNHSKSKKGILR
GLHYQTENTQGKLVRVVSGEVFDVAVDIRRDSPNFGKWVGVYLSEENKRQLWVPEGFAHG
FYVTSEEAEFVYKCTDYYNPNAEISIAWNDSHLNIKWPLLTDVPTLSIKDQNAIGFENMK
GMLHNGASR
NT seq
570 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtaatcgatactcgtattcctgatgtgaaaattatagaaccaaacgtgtttggt
gatgaacgtggtttctttatggaaacttggaatcaaaaacaattcgaagaactcgtgacg
ggcaaaccgacacagtttgtgcaagacaatcactctaaatccaagaaaggtattttgcga
ggcttgcattaccaaactgagaacacgcaaggaaagttggtgcgagtggtttcaggagaa
gtgtttgatgttgcagtcgatattagaagggactcacctaattttggaaagtgggtgggt
gtgtatctatcggaagaaaacaaacgtcaactttgggttccagagggctttgctcacggt
ttttatgtaacaagcgaagaagctgagtttgtgtataaatgtaccgattattacaaccct
aacgcagagattagtatcgcttggaatgattcacatttaaatattaaatggcctttactc
actgatgttccgacactatctataaaagatcaaaatgctataggttttgaaaacatgaaa
ggtatgttacacaatggtgcatcgagataa
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