Vanessa cardui (painted lady): 124532738
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Entry
124532738 CDS
T09161
Name
(RefSeq) jmjC domain-containing histone demethylation protein 1 isoform X1
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
vcd
Vanessa cardui (painted lady)
Pathway
vcd03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
vcd00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
124532738
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vcd03000
]
124532738
04121 Ubiquitin system [BR:
vcd04121
]
124532738
03036 Chromosome and associated proteins [BR:
vcd03036
]
124532738
Enzymes [BR:
vcd01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
124532738
Transcription factors [BR:
vcd03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
124532738
Ubiquitin system [BR:
vcd04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
SCF complex
Target recognizing subunit (F-box)
124532738
Chromosome and associated proteins [BR:
vcd03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
124532738
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
124532738
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD_4
zf-CXXC
F-box-like
JmjC
Cupin_8
F-box
JHD
LRR_4
FBXL18_LRR
PHD
Rubredoxin
Motif
Other DBs
NCBI-GeneID:
124532738
NCBI-ProteinID:
XP_046963743
EnsemblRapid:
ENSVCAG00000016051
LinkDB
All DBs
Position
10:8553025..8588649
Genome browser
AA seq
1018 aa
AA seq
DB search
MSETLPNNKKQVPRQLRERKQRKLYSDEWALGDDEAEGGRGFSLADKLESPRFEHTGAVV
EMHGTDLTVSYLQKNGFTTPLLFKEKIGLGLRVPTSNFTVNDVRMCVGSRRLLDVMDVNT
QKNIEMTMKDWQRYYDDANKERLLNVISLEFSHTRLENYVQAPRIVRLIDWVDTVWPRHL
KDQQTESTNALDDMMYPKVQKYCLMSVKGCYTDFHIDFGGTSVWYHILRGAKVFWLIPPT
EKNLQLYEKWVLSGKQSDVFFGDTVEKCIRVHLQAGYTFFIPTGWIHAVYTPSDSLVFGG
NFLHQFGIEKQLKIAQVEDVTKVPQKFRYPFFTEMLWYVLDRYVSALLGRSHLAAEGHAL
PAPPPTPKDHVHLTQNELHGLKAIVVYLHQLPAARKSVPELLTDPIALVRDVRTLVEQHR
HDKQNLAVTGVPVLKGPEESVTGERRQSSGRGGRGGHRGGPARPRPDHANSAPRRRRTRC
KKCEACQRTDCGDCVFCHDMVKFGGLGRAKQTCIMRQCLQPMLPVTASCAVCHLDGWMQT
PVAPQAKGNSGRNGPSSLRECSVCYSIVHPACVPPGGQINEDLPNSWECPTCTTMGLNHD
YKPRHFRARQKSSDLRRMSVGSDACQLSQYNNKNKLPAPPPMITVKSEVGSDTESKPEGV
DSIKTEDEIKNEEERNVEGGTVGEGEREGEWEPVAKKRRPSDEDEAPKKQALRAHLALQL
THHSAKALKKPLYPVRPAPLQFTSSSGSPWLDREAMLCVFAKLTPHELATCALVCKAWAE
YSMDPSLWRSMSFVQVRVSAAQLAGIARRQPLSLGLEWCHLARRQLAWLLARLPALRSLS
LAGSPAEAALALRSSSCPPLTALDLSFARCLDDAKLRGILAPPENSRPGGGARSGTEPSR
LAALAVLRLPGTDITDVAMLYIVQALPKLCELDASSCARLTDAGAAQLAHHGLQRLSLAG
CRLLTEAALDHLARCPNLVRLDLRHVPLVSTQAVIKFAAKSKHNLHVKDVKLVELRNT
NT seq
3057 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaaacactgccgaataacaaaaaacaagttccaaggcaactgcgtgaacgtaag
cagcggaaactgtattcagatgaatgggctctcggtgacgatgaagcagagggtggtcga
ggattttctctggctgacaagctggagagtccgcggtttgaacacactggtgccgttgtt
gagatgcatggcacggacctgacagtgtcttaccttcaaaaaaatggttttactactcca
ttgctgtttaaagagaaaattggactggggttaagggtaccaaccagcaacttcacggtg
aacgatgtgcgcatgtgcgtcggctctcggcgccttctcgacgttatggatgtaaacaca
cagaaaaacattgagatgactatgaaggattggcaacggtactacgacgacgccaacaaa
gagaggctgttgaatgtgatctcactggagttctcccacactcgcctcgagaactacgtg
caggcgcctcgcatcgtgcgcctcatcgactgggtggacaccgtttggcctcgccatctg
aaagaccaacagactgaatctaccaatgctttagacgacatgatgtatccgaaggtgcaa
aagtactgtcttatgtcagtaaagggttgctacactgatttccacattgactttggtggc
acatctgtttggtaccatattctcagaggtgcaaaagttttctggctcattccgccgact
gaaaagaatcttcaactctacgagaaatgggttctctctggcaaacaatctgacgttttc
tttggagatacagttgagaaatgcattagagttcatctgcaagctggttacacatttttc
atcccaaccggttggatccacgctgtgtacacgccgagcgactctctcgtcttcggcggt
aatttcctgcaccagtttgggatagagaagcaactcaaaattgctcaagttgaagatgtt
actaaggtgcctcagaagttccgctacccgttcttcacggagatgctgtggtacgtgctg
gaccgctacgtgagcgcgctgctgggccgctcgcacctggcggccgagggccacgcgctg
cccgcgccgccgcccacgcccaaagatcacgtgcacctcacgcagaacgaactgcacgga
cttaaggcaatagttgtgtatctgcaccagctgcccgcagctcgcaagtcagtgccggaa
ctgctaaccgatcccattgcgctcgttcgcgacgtgcggacgctggtggaacagcacagg
cacgacaaacaaaacttggcagtcaccggtgtgcccgtgctgaaagggcctgaggagtca
gtgacgggcgagcggcgtcagtcgagcgggcgcggcgggcgcggcgggcaccgcggcggg
ccggcccgcccgcgccccgaccacgccaacagcgcgccccggcgcaggcgcacgaggtgc
aagaagtgtgaagcttgtcagcgtacggactgcggcgactgtgtgttctgtcatgacatg
gtcaagttcggtggactcggtcgtgccaaacagacgtgcatcatgcgacagtgtctgcag
cccatgttgcccgttaccgcatcttgtgcagtttgtcatctcgacggctggatgcagaca
cccgtcgcgccacaggctaagggtaactcgggtcggaacggtccgtcatcgctccgtgag
tgctcagtgtgctacagtatcgtgcacccagcttgcgtgcctcccggtgggcagatcaac
gaggatctgcccaattcatgggaatgcccaacgtgtacaacaatgggccttaaccatgac
tataagccgcgacacttccgtgcgcgtcagaagtcgtcagaccttcgtcggatgagcgtg
ggttcggatgcgtgtcaattgagccaatacaacaacaaaaataagttaccggcgcctcca
ccgatgatcactgttaagtcagaagtcggttcagacactgagagcaaacctgaaggtgtt
gatagcataaagacagaagacgaaataaaaaatgaggaggaacggaacgttgaagggggt
accgttggtgagggagaacgcgagggcgagtgggagcccgtcgccaagaaaaggaggccc
agcgacgaggacgaggcgcctaagaaacaagcgctacgggcgcacctcgcactgcaactc
acacatcactcagctaaggcattaaagaagcctctatatccagtacgaccggctccgttg
cagtttacatcctcaagcggctcgccgtggctagatcgtgaagcaatgctgtgcgtgttt
gctaaattgacgccccacgagcttgccacttgcgcgcttgtttgcaaagcatgggctgag
tactcgatggatccgtcattatggcgcagtatgtcgttcgtgcaagtgcgcgtgtcggcc
gcgcagctggcgggcatcgcgcgtcggcagcccctcagtctgggccttgaatggtgccat
ctagcgaggcggcaacttgcttggttactagcgcgtcttccagcgcttcgatctctttcc
ctggccggttcaccagcggaagccgcactggctcttcgatcaagttcatgtccgccactc
actgcattggacttgtctttcgcgaggtgtttggatgatgccaaattgcggggaatcctc
gctcctccagagaattcgagaccgggtggtggagccagatcaggcactgaaccgtcgagg
cttgcggctctagccgtactacgtctacctggaacggacattacagatgtcgctatgtta
tacatagttcaggctttgccgaagctgtgcgagttggacgcgtcgtcgtgcgcgcggctg
acggacgcgggcgcggcgcagctggcgcaccacggcctgcagcgtctgtcgctcgccggc
tgccgtttgctcaccgaggccgcgctcgaccacctcgccaggtgtcccaacctcgtcaga
ttggatctacgacacgtacctctcgtgtcaacgcaagcagtaatcaagttcgccgctaaa
tcaaaacataacttacacgttaaggatgtcaagttagtggagctaaggaacacctga
DBGET
integrated database retrieval system
