Vanessa cardui (painted lady): 124534426
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Entry
124534426 CDS
T09161
Name
(RefSeq) general transcription factor IIH subunit 2
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
vcd
Vanessa cardui (painted lady)
Pathway
vcd03022
Basal transcription factors
vcd03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
vcd00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
124534426
09124 Replication and repair
03420 Nucleotide excision repair
124534426
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vcd03021
]
124534426
03400 DNA repair and recombination proteins [BR:
vcd03400
]
124534426
Transcription machinery [BR:
vcd03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
124534426
DNA repair and recombination proteins [BR:
vcd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
124534426
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ssl1
VWA_2
C1_4
VWA
DZR
Motif
Other DBs
NCBI-GeneID:
124534426
NCBI-ProteinID:
XP_046966257
EnsemblRapid:
ENSVCAG00000007397
LinkDB
All DBs
Position
12:8159945..8165671
Genome browser
AA seq
401 aa
AA seq
DB search
MADDEQDPKEYRWETGYEKTWEAIKEDEDGLVEGLVAEFAQKAARKAATPRRGPVRLGMM
RHLLVAIDCSEAMNSQDLKPTRFLCTLKLLENFVEEFFDQNPLSQLGIIALKNKRAEKIT
ELSGNVRKHIKAVQGLSNLALTGEPSLQNTLEVAGRTLRPLPGHASRELLVLFGSLTTCD
PGDIIATIQTLKTDGIRCSVIGLAAEIRICKKLCQDTGGEYGVVLDDVHYRSLLLEQTSP
PARARALDAGLVKMGFPYTPPVAQPDADPPITVCMCHLEEGEGEGEGGEGHVCPQCRSKY
CALPAQCRTCGLTLASAPHLARSYHHLFPVEPYEEVKNEGQAQFCFSCLRSFTDLDKQLF
RCSRCLEHYCWECEHVVSSSLHVCAGCASRPHLYQRLPSAD
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atggcagatgatgaacaagacccaaaagaatatcgatgggaaacaggctatgaaaaaact
tgggaggctattaaagaagatgaagacggtttggtcgaaggtttggtggcggagttcgcc
caaaaagcggctcgaaaagcggcgactccacgtcgcggtccggttagactcggcatgatg
cgccatttacttgttgcaattgattgttcagaagcaatgaattcacaggacctaaaacca
actagatttttgtgtactcttaaattgttagaaaattttgtagaagaattctttgatcag
aatccattaagtcaacttggtattatagcattgaaaaacaaaagggccgaaaaaataaca
gaattatctggaaatgttagaaaacatattaaagcagtccaagggttatctaatttagct
ttaacaggtgagccatcgttacaaaatactctggaagttgctggtaggacattaaggcct
cttcctggccacgcatctagagaacttcttgttttgtttggttctttaacaacatgtgat
cccggcgacataattgctaccatacagactctcaaaacagatggaatacggtgttctgtc
attggtttggcagcagaaataagaatctgtaaaaaattgtgtcaagatacaggcggagaa
tatggggtggtgctagatgatgtacactataggtccctcttgctagaacagacttcacct
cccgcaagagctcgggccttagatgctggtctcgtaaagatgggtttcccgtacactcca
ccagtcgctcagcctgatgctgatcctccaattactgtgtgtatgtgccacctggaggag
ggcgagggcgagggcgagggcggcgagggacacgtgtgcccgcagtgccgcagcaagtac
tgcgcgctgccggcgcagtgccgcacgtgcggactcacgctcgcctccgcgccgcacctc
gccagatcatatcatcacctgtttcctgtagaaccgtatgaagaggtcaaaaacgaggga
caagcacagttctgcttctcgtgtttaagatcttttacagacctcgataaacagctgttc
cgctgctcgcgctgcctggagcactactgctgggagtgcgagcacgtggtctcgagttcg
ctgcacgtgtgcgcgggttgcgcgtcgcgcccgcacctctaccagcgcctgcccagcgca
gactga
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