Vibrio cholerae O1 El Tor N16961: VC_1179
Help
Entry
VC_1179 CDS
T00034
Name
(GenBank) pseudouridine synthase family 1 protein
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
vch
Vibrio cholerae O1 El Tor N16961
Brite
KEGG Orthology (KO) [BR:
vch00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vch03009
]
VC_1179
Enzymes [BR:
vch01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
VC_1179
Ribosome biogenesis [BR:
vch03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
VC_1179
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
AAF94338
UniProt:
Q9KSS7
LinkDB
All DBs
Position
I:1250862..1251827
Genome browser
AA seq
321 aa
AA seq
DB search
MSEKLQKVLARAGHGSRRELEALIRAGRVSVNGKVAVLGERLEDDNAVVRIDGHVVSVKA
QEEVICRVLAYYKPEGELCTRHDPEGRRTVFDRLPKIRGSRWISVGRLDANTSGLLLFTT
DGELANRLMHPSRQVEREYLVRVFGDVTEEKVRNLVRGVQLEDGMARFEDVMYAGGEGIN
HTFYVVINEGRNREVRRLWESQGTTVSRLKRVRYGDIFLDKKLPRGGWMELDLKQVNYLR
ELVELRPEKETVLNMAPDAATRKRERTRSQKIRRAVRRHEERISATPGRSGKAPARRKPG
GESSTRNKVANQQQSSRKPRG
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaaaagttacaaaaagttttagcacgtgctggtcatggttctcgtcgtgagctt
gaagctctgatccgagctgggcgtgtaagtgttaatggcaaggtagctgtactgggcgaa
cgcctagaagatgataacgctgtcgtgcgcatcgatggacatgttgtgtctgtgaaagcg
caagaagaggtgatctgccgagttctggcttattacaaaccagaaggcgagctgtgtacc
cgtcatgatccagaaggtcgccgtacggtatttgaccgtctgccgaaaattcgtggttca
cgctggatttctgttggccgtttggacgccaacacgtcaggtttgctgctgtttaccacc
gatggtgaactggctaaccgtttaatgcacccaagccgtcaggtagaacgtgaatatctg
gttcgcgtctttggtgacgtgacggaagaaaaagttcgcaatctcgtacgtggtgtgcag
ctagaagatggtatggcgcgttttgaagatgtgatgtacgccggtggcgaaggcatcaac
catactttctacgtggtaatcaatgaaggtcgtaaccgtgaagtgcgtcgtctgtgggaa
tcacaaggtacgacagtaagccgtctgaagcgcgtacgttacggtgatattttcctcgac
aaaaaactgcctcgcggcggttggatggagcttgatctcaagcaagtgaactacctgcgt
gagttagtagaactgcgtccagagaaagaaacggtgctgaacatggcgcctgatgccgca
acgcgtaagcgtgagcgtacccgtagccagaaaattcgtcgtgcagtacgtcgtcacgaa
gagcgaatttcagctactccgggtcgtagtggaaaagcccctgcgcgccgtaagccgggt
ggtgaatcgagcacgcgcaataaagtggctaaccagcaacaaagctcgcgtaagccgcgc
ggataa
DBGET
integrated database retrieval system
