Vibrio cholerae O1 MJ-1236: VCD_001380
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Entry
VCD_001380 CDS
T00903
Name
(GenBank) O-antigen ligase
KO
K02847
O-antigen ligase [EC:
2.4.99.26
]
Organism
vcj
Vibrio cholerae O1 MJ-1236
Pathway
vcj00540
Lipopolysaccharide biosynthesis
vcj01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vcj00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
VCD_001380
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
vcj01005
]
VCD_001380
Enzymes [BR:
vcj01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.26 O-antigen ligase
VCD_001380
Lipopolysaccharide biosynthesis proteins [BR:
vcj01005
]
Core region
VCD_001380
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Wzy_C
QCR10
Motif
Other DBs
NCBI-ProteinID:
ACQ59549
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All DBs
Position
1:396350..397549
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AA seq
399 aa
AA seq
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MNNKITKTSIFLTISLLLITPGFSVVAVGLLTLYSSVKLIKNGLNLNKFDIIPLITLSAY
FLSNLPITIIDGDTLRYLDAGIRALLCIPMYFFIKNEISKGANLDNTLCTSTILASFGAL
AFAFYQFFILNMPRVDGFLFSINFGYLAAALAILSFGLSFTQTRFKYYLYLSVVAATVAT
ILTLTRGAILTLLFVFILFFIVNVRKIKFKQTLVFTLISFLLVSVSYQFSPRIQERVDFT
IFEISSIASNNIHAAASSGGRLQLWYAAVEAFKHNPIWGTTYSERESLNIELFKEGKVDE
WTSTVPRGHAHSQYFEAIASNGTLGILAIFAMLILPFGVFLNDYRKTGSPISQTGYLFAF
GFIIFCLTEAPLQANLIGTFYGFMVAIFYAYIAAKRAKN
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgaataataaaataactaaaacctcaattttccttactatctcactacttttaattaca
ccgggattttctgttgtagcggtaggattactgactctctactctagtgttaaattaatt
aaaaatggcttaaaccttaataaattcgacattattcctcttataaccctgagtgcgtat
tttttgtcaaacttaccaattaccattattgatggtgatactttaagatatttagatgca
ggcattcgtgctctgttatgtatacctatgtactttttcattaagaatgaaatttccaaa
ggcgcaaatttagataacacactatgcacatcaaccatattggcttcttttggtgcttta
gcgtttgctttttatcaatttttcatattaaacatgccacgcgttgatggttttctattt
agtatcaacttcggttatctcgcagcagctttagctatcttatcttttggcttgtcattt
acacaaacaagattcaaatattatttgtatctctcagttgtagctgcaacagtggcgaca
atcttaaccttaacaagaggagccattttaacgctactctttgttttcatcttgttcttt
atcgtcaatgtaagaaaaataaaatttaagcaaacccttgtttttactctaatcagtttt
ttattagtctcagtcagttatcaattttcaccgcgtatacaagaacgggttgattttaca
atttttgaaatatccagcattgccagtaacaatattcacgctgcagcttcatcagggggg
cgacttcaactctggtatgccgctgttgaagcatttaaacacaatccaatttggggtact
acgtattcggaaagagaaagcttaaatattgaactttttaaagaaggaaaagtggatgaa
tggacgagcacggtgcccagaggtcatgcacatagccagtattttgaagctatagctagt
aatggaacattgggaattctggcgattttcgcgatgcttatcttaccatttggggtattt
ttaaacgactatcgaaaaacaggctctccaatcagccaaactggatacctttttgccttt
gggtttatcattttctgtttaactgaagcaccactacaagccaaccttattggaactttt
tatggctttatggtggcaattttttatgcttacatcgcagccaaaagagcaaaaaattga
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