KEGG   Vibrio cholerae O1 MJ-1236: VCD_001442
Entry
VCD_001442        CDS       T00903                                 
Name
(GenBank) ATP-dependent DNA helicase Rep
  KO
K03656  ATP-dependent DNA helicase Rep [EC:5.6.2.4]
Organism
vcj  Vibrio cholerae O1 MJ-1236
Brite
KEGG Orthology (KO) [BR:vcj00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vcj03400]
    VCD_001442
Enzymes [BR:vcj01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     VCD_001442
DNA repair and recombination proteins [BR:vcj03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    VCD_001442
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 AAA_30 Viral_helicase1 AAA_22 ResIII AAA_11 SDE2_2C Phage_Mu_Gp27
Other DBs
NCBI-ProteinID: ACQ59611
LinkDB
Position
1:complement(472563..474578)
AA seq 671 aa
MKLNPRQDEAVKYVSGPCLVLAGAGSGKTRVITNKIAYLVQQCGYKARNIAAVTFTNKAA
REMKERVAQTLGKGESRGLMVSTFHTLGLNIIRREFKALGLKAGFSLFDDQDQLALLKEL
TEKQLDGDKDLLRLLLSTISNWKNDMLTPPQAKAMAKGEQQLLFAHCFELYQKQMQSYNA
LDFDDLILLPVLLLRSNEEVRQRWQNRIRYLLVDEYQDTNTSQYELVKLLVGERGRLTVV
GDDDQSIYSWRGAKPQNLVLLGEDFPSLKLIKLEQNYRSTSRILRAANILIANNPHVYQK
ALFSELAEGEKLKVILANNEDHEAERVIAEIIAHKFLNRTEYRDYAILYRGNHQSRLIEK
SLTQNRVPYKLSGGTSFFARAEIKDIMAYLRVLVNPDDDNAFLRIVNTPKREIGPATLEK
LGSYANMRGKSLFTASFELGLEQHLSGRGLENLRRFTEWLVAIADNAERGNTVEAVRALV
RDIRYEDWLYETSASPKAAEMRMKNVSDLYSWIVADLEGDNPDQQEKTLKEVVQRLTLRD
MMERGEENDDSDAVQLMTLHASKGLEFPYVYLIGAEEGILPHQTSIDEENVEEERRLMYV
GITRAQRELTFIVCKERRQFGELIKPSQSRFLDELPQDDIEWEVKKKPVTQEERMAKGQA
HIANLRAMFKK
NT seq 2016 nt   +upstreamnt  +downstreamnt
atgaagctgaacccaagacaagatgaagcggtcaagtacgtctccggaccctgtctggta
ttggcgggggcgggttcgggtaaaacacgcgtcatcaccaataaaattgcctatttggtt
cagcaatgtggctataaagcacgcaatattgctgcggttacgtttaccaataaagcggcg
cgtgagatgaaagagcgcgtagctcaaacactcggtaaaggtgagtcgcgcggcttaatg
gtgtcgaccttccatactcttggcttaaacatcattcgccgtgagtttaaagctttgggc
ctcaaagcgggtttttcactgtttgacgaccaagatcagctcgcgttacttaaagagctg
accgaaaagcagctcgacggcgataaagatctgctgcgcttgctactgagcaccatttcc
aactggaaaaatgacatgctgactccgccgcaagccaaggcaatggcgaaaggggaacag
cagctgctttttgcacactgctttgagctttaccaaaaacagatgcagtcttacaacgca
ctcgatttcgatgatttgatattgctgccggtgttactgctacgcagcaatgaagaagta
cgccaacgctggcaaaatcggattcgctatctgttggtggacgaatatcaagataccaac
accagccaatatgagttggtcaaactcttagtgggtgagcgtggccgtttaactgtggtg
ggagatgatgaccaatccatttattcatggcgtggtgcaaaaccacaaaacttggtgtta
cttggggaagattttccgagtttaaagctgattaagctcgaacaaaattatcgctcgacc
agccgcattttgcgtgcggcgaacattttaattgccaataacccccacgtttaccaaaag
gcgctcttttctgagttagcggaaggggaaaagctcaaggtcatactggccaataatgaa
gatcatgaagcagagcgagtgatcgcagaaatcatcgcccataagtttctcaatcgaacc
gaataccgagattacgcgattctttatcgcggaaaccatcaatcgcgactgattgaaaaa
tcgctgactcaaaaccgtgtgccgtacaaactttccggcggcacttcgttttttgcgcgc
gcagagatcaaagacatcatggcttacctgcgagtgctggtgaaccctgatgatgacaac
gcatttttacgcattgtgaatacaccgaagcgtgaaatcggcccagctacgctcgaaaag
ttaggcagttacgccaatatgcggggcaaaagcctatttaccgccagttttgagctcggt
ttagagcagcatttgagcgggcgagggcttgagaacttacgccgcttcactgagtggttg
gtggcgattgccgataatgctgagcggggtaacacggtggaagcggtgcgcgcattagtg
cgtgatattcgttacgaagattggttgtatgagacttccgccagtccgaaagcggccgaa
atgcgcatgaaaaacgtctccgatctctattcatggatcgtggccgatttggaaggcgat
aatcccgatcagcaagagaaaactctgaaagaggtggtgcagcgtttaactctgcgcgac
atgatggagcgtggcgaagagaacgatgacagtgatgcggtacagctgatgacactgcac
gcctcaaagggcttagaatttccgtacgtgtatttgattggagctgaagagggcattttg
ccgcatcaaaccagtattgatgaagagaatgtcgaagaagagcgccgcttaatgtacgtt
gggatcacccgagcacaacgcgagctaacgtttatcgtgtgtaaagagcgccgtcagttt
ggtgaactgatcaaaccttcgcaaagccgctttttggatgagttgccccaggacgatatc
gagtgggaagtaaagaaaaagcccgtcacccaggaagagcgtatggccaaaggccaagcg
catatcgctaatttaagagcgatgtttaagaagtaa

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