Vibrio cholerae O1 M66-2: VCM66_1802
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Entry
VCM66_1802 CDS
T00891
Symbol
msbA
Name
(GenBank) transport ATP-binding protein MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
vcm
Vibrio cholerae O1 M66-2
Pathway
vcm02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vcm00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
VCM66_1802 (msbA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vcm02000
]
VCM66_1802 (msbA)
Enzymes [BR:
vcm01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
VCM66_1802 (msbA)
Transporters [BR:
vcm02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
VCM66_1802 (msbA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
ABC_ATPase
AAA_22
DEAD
RsgA_GTPase
APS_kinase
AAA_29
Zeta_toxin
AAA_25
AAA_24
SLFN-g3_helicase
nSTAND3
MMR_HSR1
ATPase
G-alpha
AAA_15
Motif
Other DBs
NCBI-ProteinID:
ACP06108
UniProt:
C3LNI2
LinkDB
All DBs
Position
I:complement(1958898..1960646)
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AA seq
582 aa
AA seq
DB search
MSLHSDESNWQTFKRLWTYIRLYKAGLVVSTIALVINAAADTYMISLLKPLLDEGFGNAE
SNFLRILPFMILGLMFVRGLSGFASSYCLSWVSGNVVMQMRRRLFNHFMHMPVRFFDQES
TGGLLSRITYDSEQVAGATSRALVSIVREGASIIGLLTLMFWNSWQLSLVLIVVAPVVAF
AISFVSKRFRKISRNMQTAMGHVTSSAEQMLKGHKVVLSYGGQEVERKRFDKVSNSMRQQ
TMKLVSAQSIADPVIQMIASLALFAVLFLASVDSIRAELTPGTFTVVFSAMFGLMRPLKA
LTSVTSEFQRGMAACQTLFGLMDLETERDNGKYEAERVNGEVDVKDVTFTYQGKEKPALS
HVSFSIPQGKTVALVGRSGSGKSTIANLFTRFYDVDSGSICLDGHDVRDYKLTNLRRHFA
LVSQNVHLFNDTIANNIAYAAEGEYTREQIEQAARQAHAMEFIENMPQGLDTVIGENGTS
LSGGQRQRVAIARALLRDAPVLILDEATSALDTESERAIQAALDELQKNKTVLVIAHRLS
TIEQADEILVVDEGEIIERGRHADLLAQDGAYAQLHRIQFGE
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgtcattgcactctgacgaatctaactggcagacctttaagcgtctgtggacttatatc
cgcttatacaaagcgggcttggtggtttcaactatagccttagttattaatgccgctgct
gatacttatatgatttctttactaaaacctttattggatgaaggttttggtaatgcggaa
tccaacttcctgcgcattctgccgtttatgattttagggcttatgtttgtgcgtggttta
agtggatttgcctcttcttactgtttgagctgggtgtccggcaatgtggtgatgcagatg
cgtcgccgtctgtttaaccattttatgcacatgccagttcgttttttcgaccaagagtca
acgggcggcttattatcgcgcatcacatacgactcagaacaagtggctggcgcaaccagc
cgcgcgttagtcagtattgtgcgtgaaggggcgagcattattggcttgctcaccttgatg
ttttggaatagctggcagctctctttggtactgattgtcgtcgcaccagtggtggccttt
gcgattagctttgtttctaagcgttttcgtaagatttcgcgcaacatgcaaacggctatg
gggcatgtgacttcatcggcagagcagatgctcaagggccataaagtggtactgagctac
ggcggtcaagaggtcgaacgcaaacgctttgacaaagtcagtaacagcatgcgccagcaa
accatgaagctggtatcggcacagtcgattgcagacccagtgattcaaatgattgcctca
cttgctctgtttgcggtgctctttttagccagtgtcgattcgattcgcgctgagttgact
ccaggtacatttactgtggtgttttcagccatgtttggcctaatgcgtcctctgaaagct
ctgaccagtgtaacgtcggagtttcagcgtggtatggccgcttgccagaccttgtttggt
ttgatggatctcgaaaccgagcgcgataatggcaaatatgaggcagagcgtgtcaacggt
gaagtggatgtgaaagacgtaactttcacctaccaaggcaaagaaaaacctgcgttatcc
catgtttcgttctcgattccgcaagggaaaacggtcgctctggttggccgttctggctca
ggtaaatcgaccatcgcgaatctgtttactcgtttctatgatgtcgacagtggatcgatc
tgtcttgatgggcacgatgtgcgtgattacaagctgaccaatctgcgtcgtcactttgcc
ttggtttcgcaaaacgtacatctgtttaacgacaccatcgccaataacatcgcttacgct
gccgaaggtgaatacacccgcgagcagattgagcaagccgcacgtcaagcccatgcgatg
gagtttattgaaaacatgccgcaaggtttggataccgtgatcggtgagaatggcaccagt
ttatctggcggtcagcgtcagcgagtggcgattgctcgcgcattgctgcgcgatgcacct
gtgctgatcctcgatgaagcgacgtcggcactggatactgaatcggagcgtgccattcaa
gcggcgttagatgagctgcagaaaaacaaaaccgtgctggtgattgcgcaccgtttatct
accatcgaacaagcagatgaaattcttgtggttgatgaaggtgaaatcattgagcgtggt
cgccatgctgatctgttggcgcaagatggcgcatacgctcagctgcatcgcatccagttt
ggtgaatag
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