Vibrio cholerae O1 O395: VC395_2143
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Entry
VC395_2143 CDS
T02099
Symbol
rluC
Name
(GenBank) ribosomal large subunit pseudouridine synthase C
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
vcr
Vibrio cholerae O1 O395
Brite
KEGG Orthology (KO) [BR:
vcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vcr03009
]
VC395_2143 (rluC)
Enzymes [BR:
vcr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
VC395_2143 (rluC)
Ribosome biogenesis [BR:
vcr03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
VC395_2143 (rluC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
DUF3603
TGS
Orexin
Motif
Other DBs
NCBI-ProteinID:
ACP10135
LinkDB
All DBs
Position
I:complement(2264396..2265343)
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AA seq
315 aa
AA seq
DB search
MNEIRTQVQFIDIDEDMAGQRIDNFLRNQLKNIPKSVVYRILRKGEVRVNKKRVKAEYKL
EAGDVVRVPPVTVEVKENEPAPPSTKLSKVAELEHCIVYEDDHLLILNKPSGTAVHGGSG
LHFGAIEALRALRPQARFLELVHRIDRDTSGILLVAKKRSALRHLQAQFREKTVQKYYYA
LVMGHWDAECKVVNAPLLKNEVNSIVRVNPNGKPSETRFRILEKFAEATLVQASPVTGRT
HQIRVHTQYMGHPIAWDDRYGDRRFDAYTAQFGIERLFLHAANIQFVHPASEKKLEIHAP
LEAHLEQALTKMRQA
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaaatcagaactcaagtccagttcatcgacattgatgaagacatggctggtcag
cgcattgataattttttgcgcaaccaattaaaaaatattcccaaaagcgtggtttatcga
attctacgtaagggagaagtgcgcgtgaacaaaaaacgcgtaaaagcagaatacaagctc
gaagcgggcgatgtggtgcgtgtgcctcccgtcaccgtggaagtcaaagagaacgagcct
gctccaccgagtaccaaactcagtaaagtggcggaattagaacactgtattgtctatgaa
gacgatcatttactcatcctcaataaaccgtcaggtacggcagtgcatggtgggagcggt
ttacactttggtgccattgaagccttgcgcgccctgcgcccccaagcgcgttttcttgag
ttagtacaccgtattgaccgtgatacctcagggattttgctggtggccaaaaaacgctcg
gcactgcgccacttacaagctcagtttcgcgagaaaacggtgcagaagtactactacgct
ttagtcatgggacattgggatgcagagtgtaaagtggtcaatgcgccgttgctgaaaaat
gaagtcaacagcatagtgcgcgtgaaccccaacggtaagccgtcggaaacccgattccgt
attcttgagaagtttgctgaagcgacgttagttcaagcgagccctgtgactgggcgtacg
caccaaattcgtgtacacactcagtacatggggcatccaatcgcgtgggatgatcgttat
ggtgatcgccgctttgatgcttatacagcgcaatttgggattgagcgcctgtttttgcat
gcggcaaacatccaatttgtgcatcctgccagcgagaaaaagttggaaatccatgcgcca
ctcgaagcgcatttggagcaagctctgacaaaaatgcgtcaggcttaa
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