Vibrio crassostreae: IS519_19405
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Entry
IS519_19405 CDS
T08776
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
vcra
Vibrio crassostreae
Pathway
vcra01501
beta-Lactam resistance
vcra01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
vcra00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
IS519_19405
01503 Cationic antimicrobial peptide (CAMP) resistance
IS519_19405
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vcra02000
]
IS519_19405
01504 Antimicrobial resistance genes [BR:
vcra01504
]
IS519_19405
Transporters [BR:
vcra02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
IS519_19405
Antimicrobial resistance genes [BR:
vcra01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
IS519_19405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF
HSP90
Patched
Pyridox_ox_2
Motif
Other DBs
NCBI-ProteinID:
UPR32704
LinkDB
All DBs
Position
2:676910..680062
Genome browser
AA seq
1050 aa
AA seq
DB search
MLSRFFIQRPKFALVISIILTLAGAISLAILPVAEYPKISPPSVSVSAFYTGASAEVVEQ
AIADPIETSVNGVEDMIYMSSKSANDGSYNLNVTFDVGTDPDMAQVNVQNRVAQIESKLP
QEVRMVGVTVKKRSPDLLMVLNFYSPNGEYNDQFLINYVNLNIKDQLARVKGISEVNVLG
GGEYAMRVWLDPEKMANLNITTSDVNRALAEQNVQVAAGRIGAAPYDNAQEVQFNLVTKG
RLETADEFENVVLRASQDGSTVYLKDIARVELGKKFYDGNGKYRGQDASIVTLSLQSDAN
ALESGKAVMAMLDNLSKNFPEGVAYEASYDTTVFVAESIKGVVKTLIEAILLVIAVTYLF
LGSARATLIPVVAIPVSLIGTFAIMQMTGFTINTVTLFGLILAIGIVVDDAILVIENVDT
TMAKDPTISPRKATLIAMKEVTGPIITSTLVLLAVFIPVAMLPGITGIMYRQFALTICIA
VVISSINALTLSPALCSLVLKQGGGNTARWYQAFNRGLESVTNKYGQIAGFLVKKGVLLF
TFFVVALAAVTYFAKTTSTAFVPQEDKGILLVNVQLPDAASLSRTEDVTEQLLEMVEQEP
GVDGVTLVNGYAFMTGASASNGASLFIKLHDWDMRNALDGQHSAQAISQRINGRAATELP
QAIVFAMGPPAVPGMGAASGFEFVLEDTLGRSRTDLAMVMNDVIAEAAKQPEISHTFSTF
RANVPHYYVDIDREKAQQLGIPLSEIFQTLQGNLGSLYVNDFTMFGKNFRVTMQADSEHR
SSMDDLQRFHVRSSNGEMIPLSTLVTYDQIFEPDVAWRYNMYRSAVIQGQPAEGYSSGDA
IAAMERVAAEVLPQGYQYEWTGMAYQEVLAGNQAIFAFALALIFIYLFMVAQYESWTIPI
AIILVVPVATLGSFLALNLTGTPLNLYAQIGLVLLIALAAKNAILIVEFAKVEREEKDAP
IEDAAVKGGTLRFRAVNMTSWSFILGIFPLIFAAGAGHVSQNSLGISLIGGLLCVLLAGT
FLIPGFYAFVQRKREKAHGGNTKLVPLDDE
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atgttaagtcgtttctttattcaaaggcctaagttcgcccttgttatatccataatctta
acgctggcgggtgcgatttctctcgctatcttgccagtggctgaatatccaaaaattagt
ccaccgtcggtcagtgtttcggcattctacacgggcgcaagtgctgaagtggtggaacag
gcgatagccgaccccatagaaacgtcggttaacggcgtagaagatatgatctacatgtct
tctaaaagtgctaacgatggttcatacaaccttaacgtgacctttgatgttggtactgat
ccagatatggctcaggtcaacgttcagaaccgagttgctcagatcgaatcgaagcttcca
caagaagtaagaatggtgggtgtaaccgttaagaagcgctctccggacctgttgatggta
ttgaacttctactcgccaaacggtgagtacaacgaccaattcctgatcaactacgtgaac
ttgaacattaaagatcagctggctcgtgtgaagggcatcagtgaagttaacgtattgggt
ggtggtgaatacgcgatgcgtgtttggttagatcctgagaaaatggctaacctcaatata
accacctctgacgtgaatcgcgccttggctgaacagaacgttcaggtagcggctggccgt
attggtgcagcaccttacgacaacgcacaagaagtgcagttcaacttggtaacaaaaggc
cgactagaaacggctgatgagtttgaaaatgttgtgcttcgcgctagccaagatggttca
acggtttacttaaaagacatcgcacgtgttgagcttggtaaaaagttctacgacggcaat
ggtaaataccgtggtcaagacgcttcaatcgtaacgctgtcacttcaatcagacgctaac
gcgctggaaagtggtaaagcggtaatggcgatgctggacaatctaagcaaaaacttccct
gaaggcgttgcttatgaggcgagctatgacaccacagtattcgttgctgagtcgatcaaa
ggggtagtaaagaccctaatcgaagctatcttgctggttattgcggtaacgtacctgttc
ttgggtagtgcgcgtgcaaccttgattcctgtggtcgcgattccggtatctttgattggt
acctttgccatcatgcagatgacgggtttcaccatcaacacggtaactctgtttggtttg
atattagcgattggtatcgtagtagatgatgcgatcttggttatcgagaacgttgatacc
acgatggctaaagacccaaccatttcaccacgtaaagcaacgctcatcgcgatgaaagaa
gtaacgggtccgatcattacttctacattggttctgttagcagtattcattccagtagcc
atgctgccaggtatcaccggcatcatgtatcgtcagttcgctctgactatctgtattgcg
gttgttatctcttctattaacgcactaacgttgtcaccagcattgtgttcattggttctt
aaacagggcggtggtaacacagcacgttggtaccaagcgtttaaccgtggtcttgaatcc
gtaaccaacaaatacggtcaaattgcaggcttccttgtgaaaaagggtgttctactgttt
accttctttgttgtggcgctagcggcggtaacttacttcgcgaaaactacgtctacggca
tttgtacctcaagaagataaaggcatcttgctggttaacgtgcagcttcctgacgcggca
tcactgtctcgtacagaagatgtgactgagcaattgctagagatggttgagcaagagccg
ggtgttgatggcgtaacactggttaatggctatgcattcatgacgggcgcttctgcttcg
aatggtgcgtcgttatttatcaaactgcatgattgggatatgcgtaacgcactggacggt
caacattcagcgcaagctatctcacaacgtattaacggtcgagcagcaacagaattgcct
caagcgattgtatttgcaatgggacctccagcagtaccgggtatgggtgcagcgtctggt
tttgagttcgttcttgaagatacattaggtcgtagccgtactgatctcgcgatggttatg
aatgacgtgattgctgaggccgctaaacagcctgagatttcacatacattcagtaccttc
cgtgccaatgtaccgcactactatgtcgacattgaccgtgagaaagcgcagcaacttggt
attccgttgtcggaaatcttccaaacactacaaggtaacctaggttctctgtatgtgaat
gatttcaccatgtttggtaagaacttccgcgtaaccatgcaagctgacagtgaacaccgt
agcagcatggacgacctacaacgattccacgttcgttcgtctaatggcgagatgatcccg
ttaagcacattggtgacttacgaccagatctttgaaccagatgtagcatggcgttacaac
atgtaccgcagtgccgtgattcaaggtcaacctgcagaaggttactcaagtggtgatgcg
attgcggcaatggaacgtgtagctgcagaagtattgcctcagggttatcagtacgaatgg
acaggcatggcttaccaagaagtactagcaggtaaccaagcgatctttgctttcgcactg
gctctgatcttcatctatctgtttatggtggctcaatacgagagttggacaataccgatt
gcgattatcctcgtggtacctgtcgcaaccttaggctccttcttagcgttgaatctaacg
ggcactccgctgaacctttatgcacagattggtttggttctcttgatagccttggccgcg
aagaacgcaatcttgattgtggaattcgcaaaggttgagcgtgaagagaaagatgcaccg
attgaagatgcggcggtgaagggcggtacgctgcgtttccgtgctgtgaacatgacgtct
tggtcgttcatcttaggtattttcccgcttatcttcgctgcgggcgcaggccacgtgagt
cagaactctctgggtatttcactgatcggcggtctgttgtgtgtgttattggcgggtacg
ttcctaatccctggcttctacgcattcgtgcaacgtaagcgtgagaaagcacacggtggt
aataccaaactggttccgcttgatgatgaatag
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integrated database retrieval system
