KEGG   Vespa crabro (European hornet): 124424423
Entry
124424423         CDS       T09462                                 
Name
(RefSeq) DNA ligase 1 isoform X1
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
vcrb  Vespa crabro (European hornet)
Pathway
vcrb03030  DNA replication
vcrb03410  Base excision repair
vcrb03420  Nucleotide excision repair
vcrb03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:vcrb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    124424423
   03410 Base excision repair
    124424423
   03420 Nucleotide excision repair
    124424423
   03430 Mismatch repair
    124424423
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:vcrb03032]
    124424423
   03400 DNA repair and recombination proteins [BR:vcrb03400]
    124424423
Enzymes [BR:vcrb01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     124424423
    6.5.1.6  DNA ligase (ATP or NAD+)
     124424423
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     124424423
DNA replication proteins [BR:vcrb03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    124424423
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     124424423
DNA repair and recombination proteins [BR:vcrb03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     124424423
   NER (nucleotide excision repair)
    Other NER factors
     124424423
   MMR (mismatch excision repair)
    Other MMR factors
     124424423
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C mRNA_cap_enzyme DUF5406
Other DBs
NCBI-GeneID: 124424423
NCBI-ProteinID: XP_046819410
EnsemblRapid: ENSVCRG00010015050
LinkDB
Position
5:8085269..8090058
AA seq 874 aa
MIQRSITSFFTKTNVQKKDTDNSEDNLSVKYEKELSSGGKGKRKRQDSPNGKNSTRSSKS
TTKNENQEDASNSTQERKKNKKSNTPKKAIKKSKKEKEQQLDSSAELESTITLESKKSVQ
KNEKEENKVLGVSQLDDTKINETQESSLDSSNEGDHEEEKNISEKKSDTELGSDSESGGE
VSKQSKITKKTNEKNRNFFAPKENKSPKSNTADSKKSAVDFYNPNTTKYHPINDACWKKD
EMVPYIALTRTLELIEETSARLKIIDILSNYFRSVIVLSPNDLLPSIYLCLNQLAPAYEG
IILGVAETNLLKAIAQCTGRTLAQLKADVQNVGDIGIVAEGSRSNQRTMFQPAPLTVSHV
YTTLKEIAQMIGHSSLSKKLNKIQSLFVACRFTEARYFIRSLAGKLRVGLAEQSLLQALA
LACTKTPPEQNYPFEILDVSKNMSRENFKQKYDEIALVIKTTYCECPNYDLIIPVLLKEG
VQSLPEKCKITPGVPIKPMLAHPTKGVQEVLTRFEGLKFTCEWKYDGERAQIHMKDNGEI
SIYSRNQENNTSKYPDIIARFKNTRKENVKNCILDCESVAWDNENKQILPFQVLSTRKRK
DANEADIKVQVCVFMFDLLYLNNESLVQKPFLERRQLLKEYFIEVEGEWKFATNLDTSKI
EEVQEFLEESVKGNCEGLMVKTLEKEATYEIAKRSRNWLKLKKDYLDGMGDTLDLVVIGG
YIGKGKRTGTYGGFLLACYDKENEEYQSLCKIGTGFSEEDLQKHTQFFKEHLISQSKSYY
RFDSSHEPDHWFEPIQVWEIKCADLSLSPVHRAAIGIVDSEKGISVRFPRFIRVRDDKNC
EDATTAQQVAEMYNSQEQIKNKTTDAKTTEEDFY
NT seq 2625 nt   +upstreamnt  +downstreamnt
atgatacaacgaagcataacatcattttttacaaaaactaatgtacaaaaaaaagataca
gataacagtgaggataatttaagtgtcaaatatgaaaaggaattaagttctggaggaaaa
ggaaaacgaaaacgacaagacagtccaaatggcaaaaattcaactagatcttctaaatca
acaactaaaaatgagaatcaagaagatgcaagtaattcaacgcaagaaaggaaaaagaat
aaaaaatctaatacacccaagaaagctataaaaaaatcgaaaaaagaaaaagagcagcaa
ttagattcgagtgcagagttggaatcaactattacgctagaatccaaaaaatctgtacag
aaaaatgaaaaggaagaaaataaagttttaggagtgtctcagttggatgatactaagatt
aatgaaactcaagaatcttcattggatagttcaaacgaaggagaccatgaagaagagaaa
aatatttctgaaaaaaaatctgataccgaattgggtagtgattcagaaagtggaggagaa
gtttcgaaacaatctaaaattactaaaaaaactaatgaaaagaaccgtaatttctttgca
cctaaagaaaataaatctccaaaatctaatacggcggacagcaaaaaatctgccgttgat
ttttacaatccaaatacaactaaatatcatccaataaatgatgcttgctggaaaaaagat
gaaatggtaccatatattgcactaactagaactttggaattgatagaagagacaagtgcc
agattaaaaattattgacatattatcaaattattttcgttctgtcatagttttaagtcca
aacgatttactaccaagtatatatttatgtttgaatcaattagcacctgcatatgaaggt
attattttgggagtggcagagacgaatcttttgaaggcaatagcacagtgtactggtcga
acactggcacaattaaaagcagatgtacaaaatgttggcgatattgggattgtggctgaa
ggaagtcgttcaaatcagagaactatgttccaaccagcgccacttacagtgtcgcatgta
tatactactttaaaagaaattgcacaaatgataggtcattcgtctctttcgaagaaatta
aataaaattcagtcccttttcgttgcatgtcgcttcactgaagctagatactttattaga
tctttagctgggaagcttcgagtgggtttagcagagcaatctctcttgcaggcattggca
ttagcatgtactaagacaccacctgagcaaaattatccatttgaaattttagatgtcagt
aaaaatatgtcacgtgaaaatttcaaacagaaatatgatgaaattgctcttgtaatcaaa
actacttactgtgaatgtcctaattatgatttaattataccagtgttactaaaagaagga
gttcaatctctaccagaaaaatgtaaaattactccaggagtacctatcaagcctatgctg
gctcatcctacaaagggagtccaagaagttttaacacgatttgaagggttaaagttcaca
tgcgaatggaaatacgatggtgaaagagcacagattcatatgaaggacaatggtgaaatt
agtatttacagtagaaatcaagaaaataatacatccaagtatcctgatataattgcacgt
ttcaaaaatacacgaaaggaaaacgtcaaaaattgtattcttgattgtgaatcagtagcc
tgggataatgaaaacaaacaaattcttccatttcaagtgttgagtacacgtaaacgcaaa
gatgctaatgaagcagatatcaaagtacaagtttgtgtatttatgttcgacttattatat
ttaaacaatgaatctctcgttcaaaaaccatttctagaacgtcgtcagcttttaaaagaa
tattttatagaagtagaaggagaatggaaatttgctacgaacttagatacctcaaagata
gaagaagttcaagaatttttggaagaatccgtaaaaggaaattgtgaaggtctaatggtt
aaaacattagaaaaagaagcaacgtatgaaattgctaaaagatctcgaaattggttgaaa
ctgaagaaagattatttagatggaatgggtgatacgttagatttagtagtaattggtgga
tatattgggaaaggaaagagaactggtacttatggaggttttcttttggcttgctatgat
aaagaaaatgaggaatatcagagtttgtgtaagattggaactggatttagcgaagaagat
cttcaaaagcatacacaatttttcaaagaacatttgatatcacaatcaaagtcgtattat
cgtttcgattcaagtcatgaaccggatcattggttcgaacctattcaagtttgggaaata
aaatgtgcagatctttctttgtcacctgttcatagagccgctatcggaatcgttgactca
gaaaaaggcatatcggtacggtttccaagatttatacgtgtacgtgatgataagaattgt
gaagatgctacaacggcacagcaagtggcagagatgtataacagtcaagaacagataaaa
aataaaacaacagatgcgaaaacaacggaagaggatttttattaa

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