Vespa crabro (European hornet): 124430160
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Entry
124430160 CDS
T09462
Name
(RefSeq) histone deacetylase HDAC1
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
vcrb
Vespa crabro (European hornet)
Pathway
vcrb03082
ATP-dependent chromatin remodeling
vcrb03083
Polycomb repressive complex
vcrb04213
Longevity regulating pathway - multiple species
vcrb04330
Notch signaling pathway
vcrb04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
vcrb00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
124430160
03083 Polycomb repressive complex
124430160
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
124430160
04350 TGF-beta signaling pathway
124430160
09150 Organismal Systems
09149 Aging
04213 Longevity regulating pathway - multiple species
124430160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vcrb03036
]
124430160
Enzymes [BR:
vcrb01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
124430160
Chromosome and associated proteins [BR:
vcrb03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
124430160
HDAC complexes
Sin3A-HDAC complex
124430160
BRAF-HDAC complex
124430160
REST complex
124430160
SHIP complex
124430160
MiDAC complex
124430160
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
124430160
Heterochromatin formation proteins
Other heterochromatin formation proteins
124430160
Chromatin remodeling factors
NuRD complex
124430160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
124430160
NCBI-ProteinID:
XP_046832304
EnsemblRapid:
ENSVCRG00010007664
LinkDB
All DBs
Position
17:complement(2518172..2522945)
Genome browser
AA seq
492 aa
AA seq
DB search
MSTLSHGKKRVCYYYDSDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKAT
ADEMTKFHSDEYIRFLRSIRPDNMSEYNKQMQRFNVGEDCPVFDGLYEFCQLSAGGSVAA
AVKLNKQASEICINWGGGLHHAKKSEASGFCYVNDIVLGILELLKYHQRVLYIDIDVHHG
DGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNIPLRDGMDDESYESI
FVPIISKVMETFQPSAVVLQCGADSLTGDRLGCFNLTVRGHGKCVEFVKKYNLPFLMVGG
GGYTIRNVSRCWTYETSVALGSEIANELPYNDYFEYFGPDFKLHISPSNMANQNTPEYLE
KIKTRLFENLRMLPHAPGVQVQAIPEDGAVIEDSEAEEKINPDERLSQRDLDKRIQHENE
YSDSEEEGDGGRRDNRSFKTSRKRPRLEKGQEGMESDIKKEEDIKSEAKENDKDEKMNAT
NEETKKDGGANP
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgtctacattatctcatggcaagaagcgagtctgctactattatgatagcgatatagga
aattattattatggtcaaggccatcctatgaaaccacatcgtataaggatgacacataat
ttactacttaattatggtctttacagaaaaatggagatatatagaccacataaagctaca
gctgatgaaatgacaaaatttcatagcgacgagtacataagatttttgagatcaatcaga
ccagataatatgtcagaatacaataaacaaatgcaaagatttaatgtgggtgaagattgc
cctgttttcgatggcttgtatgaattctgccaattgtcagctggtggttctgtggcagct
gcagttaaacttaataaacaagcatcagaaatctgtattaattggggtggtggtttacat
catgctaagaagagcgaagcatcaggtttctgttatgtaaatgatattgtacttggaatt
ttggaattacttaaatatcatcaaagagttttatatattgatattgatgttcatcatggt
gatggtgttgaagaagcattttacacgacagatagagtaatgactgtctcatttcataaa
tatggtgaatattttcctggtacaggagatctcagagatattggtgctggaaagggcaaa
tattatgctgtcaacatacctttacgggatggtatggatgatgaaagttatgagtcaatt
tttgtacctataatttcaaaagtcatggaaacttttcaaccatcagcagttgttttacaa
tgtggagcagattccttgacaggtgacaggcttggctgttttaatttaactgtaagagga
catggtaaatgtgtagaattcgtaaaaaaatataatctaccatttttaatggttggagga
ggtggttatacgattagaaatgtatctagatgttggacatatgaaacatctgttgctcta
ggatcggaaattgctaatgaacttccatataatgattattttgaatactttggtcctgat
ttcaagttacatataagcccctcaaatatggccaatcagaatacacctgagtatttggaa
aagataaaaacaagactattcgaaaatttaagaatgttacctcatgcgccgggggttcaa
gtgcaagcaattccagaggatggtgctgttatcgaagattcagaagcagaagagaaaata
aatccagatgaaagattatcacaaagggatttagataaaaggatacaacatgaaaatgaa
tacagcgatagcgaagaggagggagatggtggtagaagagacaatagatcattcaaaact
tctagaaagcgtccaagacttgaaaagggtcaggaaggtatggaaagtgatataaaaaag
gaagaagatattaaatccgaagcaaaagagaacgataaagacgaaaaaatgaatgccacg
aatgaggagacgaaaaaagatggtggtgcgaatccctga
DBGET
integrated database retrieval system