KEGG   Vespa crabro (European hornet): 124430160
Entry
124430160         CDS       T09462                                 
Name
(RefSeq) histone deacetylase HDAC1
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
vcrb  Vespa crabro (European hornet)
Pathway
vcrb03082  ATP-dependent chromatin remodeling
vcrb03083  Polycomb repressive complex
vcrb04213  Longevity regulating pathway - multiple species
vcrb04330  Notch signaling pathway
vcrb04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:vcrb00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    124430160
   03083 Polycomb repressive complex
    124430160
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    124430160
   04350 TGF-beta signaling pathway
    124430160
 09150 Organismal Systems
  09149 Aging
   04213 Longevity regulating pathway - multiple species
    124430160
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:vcrb03036]
    124430160
Enzymes [BR:vcrb01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     124430160
Chromosome and associated proteins [BR:vcrb03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     124430160
   HDAC complexes
    Sin3A-HDAC complex
     124430160
    BRAF-HDAC complex
     124430160
    REST complex
     124430160
    SHIP complex
     124430160
    MiDAC complex
     124430160
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     124430160
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    124430160
  Chromatin remodeling factors
   NuRD complex
    124430160
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 124430160
NCBI-ProteinID: XP_046832304
EnsemblRapid: ENSVCRG00010007664
LinkDB
Position
17:complement(2518172..2522945)
AA seq 492 aa
MSTLSHGKKRVCYYYDSDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKAT
ADEMTKFHSDEYIRFLRSIRPDNMSEYNKQMQRFNVGEDCPVFDGLYEFCQLSAGGSVAA
AVKLNKQASEICINWGGGLHHAKKSEASGFCYVNDIVLGILELLKYHQRVLYIDIDVHHG
DGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNIPLRDGMDDESYESI
FVPIISKVMETFQPSAVVLQCGADSLTGDRLGCFNLTVRGHGKCVEFVKKYNLPFLMVGG
GGYTIRNVSRCWTYETSVALGSEIANELPYNDYFEYFGPDFKLHISPSNMANQNTPEYLE
KIKTRLFENLRMLPHAPGVQVQAIPEDGAVIEDSEAEEKINPDERLSQRDLDKRIQHENE
YSDSEEEGDGGRRDNRSFKTSRKRPRLEKGQEGMESDIKKEEDIKSEAKENDKDEKMNAT
NEETKKDGGANP
NT seq 1479 nt   +upstreamnt  +downstreamnt
atgtctacattatctcatggcaagaagcgagtctgctactattatgatagcgatatagga
aattattattatggtcaaggccatcctatgaaaccacatcgtataaggatgacacataat
ttactacttaattatggtctttacagaaaaatggagatatatagaccacataaagctaca
gctgatgaaatgacaaaatttcatagcgacgagtacataagatttttgagatcaatcaga
ccagataatatgtcagaatacaataaacaaatgcaaagatttaatgtgggtgaagattgc
cctgttttcgatggcttgtatgaattctgccaattgtcagctggtggttctgtggcagct
gcagttaaacttaataaacaagcatcagaaatctgtattaattggggtggtggtttacat
catgctaagaagagcgaagcatcaggtttctgttatgtaaatgatattgtacttggaatt
ttggaattacttaaatatcatcaaagagttttatatattgatattgatgttcatcatggt
gatggtgttgaagaagcattttacacgacagatagagtaatgactgtctcatttcataaa
tatggtgaatattttcctggtacaggagatctcagagatattggtgctggaaagggcaaa
tattatgctgtcaacatacctttacgggatggtatggatgatgaaagttatgagtcaatt
tttgtacctataatttcaaaagtcatggaaacttttcaaccatcagcagttgttttacaa
tgtggagcagattccttgacaggtgacaggcttggctgttttaatttaactgtaagagga
catggtaaatgtgtagaattcgtaaaaaaatataatctaccatttttaatggttggagga
ggtggttatacgattagaaatgtatctagatgttggacatatgaaacatctgttgctcta
ggatcggaaattgctaatgaacttccatataatgattattttgaatactttggtcctgat
ttcaagttacatataagcccctcaaatatggccaatcagaatacacctgagtatttggaa
aagataaaaacaagactattcgaaaatttaagaatgttacctcatgcgccgggggttcaa
gtgcaagcaattccagaggatggtgctgttatcgaagattcagaagcagaagagaaaata
aatccagatgaaagattatcacaaagggatttagataaaaggatacaacatgaaaatgaa
tacagcgatagcgaagaggagggagatggtggtagaagagacaatagatcattcaaaact
tctagaaagcgtccaagacttgaaaagggtcaggaaggtatggaaagtgatataaaaaag
gaagaagatattaaatccgaagcaaaagagaacgataaagacgaaaaaatgaatgccacg
aatgaggagacgaaaaaagatggtggtgcgaatccctga

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