KEGG   Vespa crabro (European hornet): 124431108
Entry
124431108         CDS       T09462                                 
Name
(RefSeq) DNA ligase 4 isoform X1
  KO
K10777  DNA ligase 4 [EC:6.5.1.1]
Organism
vcrb  Vespa crabro (European hornet)
Pathway
vcrb03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:vcrb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    124431108
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vcrb03400]
    124431108
Enzymes [BR:vcrb01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     124431108
DNA repair and recombination proteins [BR:vcrb03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    DNA Ligase 4 complex
     124431108
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N BRCT DNA_ligase_A_C DNA_ligase_IV RNA_ligase BRCT_2 Tra_M
Other DBs
NCBI-GeneID: 124431108
NCBI-ProteinID: XP_046834516
EnsemblRapid: ENSVCRG00010007542
LinkDB
Position
20:2330943..2335427
AA seq 900 aa
MSVSLASRITFKRLCDVLEKVIKARAPEKIKILQEFILQCKKEGGKLKKDDSNANISMFP
VLRLLLPQCDRKRSSYNLKQKLLTNIYIRVLCLGKSSEDAKKLINYRIPNSSKSEGSDIS
EIIYSVVRKYLLHGKESYTIDRINIFLDNISKASQTNNSKDELFKELFRQISALELKWLT
RIILKDLKLGIGTKKILQVYHPKAGQCFDTNFNLQKLCDNFDQGKKEINYNIEVFSFFKS
MNLERSTIKDASQLFHNNHEYFVQMKFDGERSQIHMKDGIFQYFTRQGIDITNNWGYGKS
NSDGFLTSTFSRRLNRQCKSIILDGELMGWNKKKKEFGSKGMSYDVKKLTANSSYQPCFV
AYDIILYNDKLLINLPYKERLNILNDAFQDEEGSLIKCQNTIISNSKDLLDIFNKSLENN
EEGIVLKKSDFIYKPNVRNGTGCYKLKAEYSEDLVQDIDLIILGGYYGEGKFNGLINSFM
MGVAKMPEIEGKEPTQFFSVVSVCSGIAMEELTKLHSKLEKYWIKDCPNCVIKPKKHLPD
LWIRPEHSLILTLRATEIVKTDVFPIGYTLRFPRVIQIRGDKPWYSVCTNTEFLSLIKTE
GTIHKLTKRNATLNDIETIVVEKKKKITKSSSSKFEEVFYNNIQSKKNLVPITRLLYGKE
ICVINGNDEITKENIEDKLLLHNAKIVQNPSEDTYCVIVGNVKKAKARNIIQSGKYDVVT
IDWYKRIIKKENWFALESFLPWDLLCIRDFTKRSLIEKYDDYYDSYTIDANEESLERSLK
RIEHMIKNEEVVFTKEEGMDKELFENGISPFSIFKQIIGYFKKCSDSTKFKFRFMGGIIK
EDIDEHINYIFIEDNSLLSMKSSEVDETIRKSMKKIINSKWIKDCFRDQKFYSIDEYIVE
NT seq 2703 nt   +upstreamnt  +downstreamnt
atgagtgtatcattagcttcaagaattacatttaaaagattgtgcgatgtcttagaaaaa
gttattaaagcacgtgcccctgaaaaaattaaaattctacaggaatttattttgcaatgt
aaaaaggaaggtggcaaattaaaaaaagacgattcaaatgcaaatatttcaatgtttcct
gtgttaagattgcttttaccacaatgcgatcgtaaacgttcatcatataatttgaagcag
aaattactaacaaatatttacattcgtgtactttgtcttggaaaatctagtgaagatgcc
aaaaaactgataaattatagaattcctaattcaagtaaatctgaaggaagtgacatttct
gaaataatttactcagttgtgagaaaatatttgttacatgggaaggaatcatatacaata
gatagaataaatatatttttagacaatatatcaaaagcaagtcaaacgaataatagtaaa
gatgaattatttaaagaattatttagacaaataagcgcattagaattaaaatggttgact
cgtattattttaaaggatctaaagttaggcattggaacaaaaaaaatattgcaagtttat
catccaaaagcaggtcaatgttttgatacaaatttcaacttacaaaaactttgtgataat
tttgatcaaggtaaaaaggaaattaattataatattgaagttttctcttttttcaaatct
atgaatttggaaagatctacaattaaggatgcttcacaactttttcataataatcatgag
tattttgtacaaatgaaatttgatggtgaacgttcccaaatacatatgaaagatggtata
ttccaatacttcacaagacagggaattgatatcacaaataattggggatatggaaaaagt
aattcagatggttttctcactagtacattttcgcgtcgtttaaatcgacaatgtaagtct
ataattttggatggtgaattaatgggttggaataaaaaaaaaaaagagtttggttcaaaa
ggtatgagctatgatgttaaaaagcttacagctaatagttcctatcaaccctgttttgtg
gcatatgatattattttatataatgacaaattgctcattaatttaccctataaagaaaga
ttaaatatattaaatgatgcatttcaagatgaagaaggttcattaattaaatgccaaaat
acaatcatttctaatagtaaagatttattggatatttttaataaaagtcttgaaaataat
gaagaaggaatagttttaaaaaaatctgatttcatttataaaccaaatgttcgcaatgga
actggttgctacaaattaaaagctgagtactcagaagatctagtacaagatatagactta
attattcttggaggttattatggcgaaggaaagttcaatggtttgataaacagctttatg
atgggtgttgccaaaatgcctgaaattgaaggcaaagaacctacacaatttttctctgtt
gtatcagtgtgtagtggcattgcaatggaagaattgacgaaacttcattcaaaattggag
aagtattggattaaagactgtccaaattgtgtgatcaaacccaagaaacatcttccagat
ttatggattcgacctgagcattcattgattttaacgctacgagcaacggaaatagtgaaa
actgatgtttttccgattggttatactttacgttttcctcgtgtcatacagattagagga
gataagccttggtatagtgtttgtactaacacagaatttttatcattgataaagactgaa
ggaacaattcataaattgactaaaagaaatgcaacattgaatgatattgaaacaatagtt
gttgaaaagaaaaagaaaataacaaagtcgagttcgtcaaagtttgaagaagtgttttat
aataatatacaatcaaaaaaaaatctcgtaccgatcacacgtttattgtatggaaaagaa
atttgtgttattaatggtaatgatgaaataactaaagaaaatatagaagataagctctta
ttgcataatgcgaaaatcgtacagaatccaagtgaagatacttattgtgtgatcgttgga
aatgtcaaaaaggcgaaagcgagaaacataatacaaagtggaaaatatgatgtagttacc
atagattggtataaacgtattatcaaaaaagaaaactggtttgcattagaaagtttttta
ccatgggatcttttatgcattcgcgattttaccaaacgatcacttattgaaaaatacgat
gattactatgacagttatacaatagatgctaatgaagaaagtttagaacgttctttaaaa
cggatagaacatatgataaaaaatgaagaagttgtatttaccaaagaggaaggaatggat
aaagaattgttcgaaaatggtatatccccattttctatctttaagcaaattatcggatat
tttaagaaatgttcggattcaacgaaatttaaatttcgctttatgggtggtataataaaa
gaagatatagatgaacacattaattatatcttcattgaagataattcattgttatctatg
aaatcttcggaagttgatgaaactataaggaaatctatgaaaaaaataatcaacagtaaa
tggataaaggattgttttcgggatcaaaagttttattcgatcgacgaatatattgttgaa
taa

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