Vibrio cholerae O1 El Tor MS6: MS6_1791
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Entry
MS6_1791 CDS
T03666
Name
(GenBank) ribosomal large subunit pseudouridine synthase C
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
vcs
Vibrio cholerae O1 El Tor MS6
Brite
KEGG Orthology (KO) [BR:
vcs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vcs03009
]
MS6_1791
Enzymes [BR:
vcs01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
MS6_1791
Ribosome biogenesis [BR:
vcs03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
MS6_1791
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
DUF3603
TGS
Orexin
Motif
Other DBs
NCBI-ProteinID:
BAP03446
LinkDB
All DBs
Position
1:complement(2039961..2040908)
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AA seq
315 aa
AA seq
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MNEIRTQVQFIDIDEDMAGQRIDNFLRNQLKNIPKSVVYRILRKGEVRVNKKRVKAEYKL
EAGDVVRVPPVTVEVKENEPAPPSTKLSKVAELEHCIVYEDDHLLILNKPSGTAVHGGSG
LHFGAIEALRALRPQARFLELVHRIDRDTSGILLVAKKRSALRHLQAQFREKTVQKYYYA
LVMGHWDAECKVVNAPLLKNEVNSIVRVNPNGKPSETRFRILEKFAEATLVQASPVTGRT
HQIRVHTQYMGHPIAWDDRYGDRRFDAYTAQFGIERLFLHAANIQFVHPASEKKLEIHAP
LEAHLEQALTKMRQA
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaaatcagaactcaagtccagttcatcgacattgatgaagacatggctggtcag
cgcattgataattttttgcgcaaccaattaaaaaatattcccaaaagcgtggtttatcga
attctacgtaagggagaagtgcgcgtgaacaaaaaacgcgtaaaagcagaatacaagctc
gaagcgggcgatgtggtgcgtgtgcctcccgtcaccgtggaagtcaaagagaacgagcct
gctccaccgagtaccaaactcagtaaagtggcggaattagaacactgtattgtctatgaa
gacgatcatttactcatcctcaataaaccgtcaggtacggcagtgcatggtgggagcggt
ttacactttggtgccattgaagccttgcgcgccctgcgcccccaagcgcgttttcttgag
ttagtacaccgtattgaccgtgatacctcagggattttgctggtggccaaaaaacgctcg
gcactgcgccacttacaagctcagtttcgcgagaaaacggtgcagaagtactactacgct
ttagtcatgggacattgggatgcagagtgtaaagtggtcaatgcgccgttgctgaaaaat
gaagtcaacagcatagtgcgcgtgaaccccaacggtaagccgtcggaaacccgattccgt
attcttgagaagtttgctgaagcgacgttagttcaagcgagccctgtgactgggcgtacg
caccaaattcgtgtacacactcagtacatggggcatccaatcgcgtgggatgatcgttat
ggtgatcgccgctttgatgcttatacagcgcaatttgggattgagcgcctgtttttgcat
gcggcaaacatccaatttgtgcatcctgccagcgagaaaaagttggaaatccatgcgcca
ctcgaagcgcatttggagcaagctctgacaaaaatgcgtcaggcttaa
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