Venatoribacter cucullus: GJQ55_03875
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Entry
GJQ55_03875 CDS
T07641
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
vcw
Venatoribacter cucullus
Pathway
vcw00521
Streptomycin biosynthesis
vcw00523
Polyketide sugar unit biosynthesis
vcw00541
O-Antigen nucleotide sugar biosynthesis
vcw01100
Metabolic pathways
vcw01110
Biosynthesis of secondary metabolites
vcw01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
vcw00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
GJQ55_03875 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
GJQ55_03875 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
GJQ55_03875 (rfbC)
Enzymes [BR:
vcw01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
GJQ55_03875 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
QQD23675
UniProt:
A0A9X7UVJ2
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All DBs
Position
800058..800612
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AA seq
184 aa
AA seq
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MQITRAGRFADVYVLTPPVYSDERGFFMESFRASWLHDIAPGVQFVQDNHSFSHAGVLRG
LHYQLQQPQGKLVRVMRGRILDVVVDMRAASPTFGQWERVELSAANRCQLWIPPGYAHGF
YTLEDADCLYRCSDYYHAASERVLRWDDPQLAIQWPAAQPLVSAKDQQGVAFAEADYFTE
PGLL
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
atgcagattacccgcgccggccgcttcgccgatgtgtacgtactgacgccgccggtgtac
agcgacgagcgcgggttttttatggaaagcttccgcgccagctggctgcatgatatcgcg
cccggtgtgcagtttgtgcaggataaccactcgttttcccacgcgggtgtgctgcgcggt
ttgcattatcagctgcagcagccacagggcaaactggtgcgggtaatgcgcggccgcatt
ctggatgtggtggtggatatgcgcgcagcatcacccaccttcgggcaatgggagcgcgtc
gaattatccgccgccaaccgctgccagttatggataccgccgggttatgcccacggcttt
tacacactggaagacgccgattgtttataccgctgcagcgattattaccacgccgccagc
gagcgggtattgcgctgggatgatccgcagctggctattcaatggccggcagcacagccg
ctggtgtcggccaaagatcaacagggcgtggcctttgctgaagccgattattttaccgaa
cccgggctgctttaa
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