Vibrio cholerae O49 1154-74: VAA049_1745
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Entry
VAA049_1745 CDS
T03828
Name
(GenBank) tetratricopeptide repeat family protein
KO
K07114
Ca-activated chloride channel homolog
Organism
vcx
Vibrio cholerae O49 1154-74
Brite
KEGG Orthology (KO) [BR:
vcx00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vcx02000
]
VAA049_1745
Transporters [BR:
vcx02000
]
Other transporters
Pores ion channels [TC:
1
]
VAA049_1745
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA_2
TPR_2
TPR_19
TPR_1
TPR_14
TPR_12
TPR_7
TPR_8
TPR_6
TPR_10
TPR_16
TPR_4
Motif
Other DBs
NCBI-ProteinID:
AKB02146
LinkDB
All DBs
Position
1909760..1911649
Genome browser
AA seq
629 aa
AA seq
DB search
MSSLILLYPHWLGLLVPLLLLAAWRGLRQNQRGLIAPHLAQALGIETRTRRSFGGVLVLS
WIVATLAMAGPSWQSAERPSVQNSAARVLIMDMSRSMYATDLTPNRLTQARYKALDLLKG
WQEGSTGLVAYAADAYVVSPLTSDSATLANLLPNLSPDIMPYQGSDAAAAVSLAITMLQQ
SGHQQGDLILITDDMSVTEREKLISLLQGSPWRLVTLAIGTPSGAPIPLGDGSLLKDRQG
QTVIAKTAFDQLQQLSQRVQGVLTAYRADGADVAHILSLTQQPIDIAESTSRQAITERVN
NGYWLVLPLLIAALCLFRRGVIFSLLLLFGVSLPNQQAWASAWLNQDQQAMRMFNNEQYA
QAAEAFRDPRWQGAARYYAKDYQGAIDAYSQIANPDTATQYNLANAYAQAGELQKAQDLY
EHVLKQEPNHQDARHNLDVVKAAQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQDSSSGSS
GQEAQEDSSANPSNTAQEQEASSQTKGASTPDPQQGQQESNEPKASAKPQEQPSAVDDAQ
AGEPSAHQEQSKDPQNGQPSRTEQNGEQSDKANAAQSSASVTSSDPNLDPMLRKLEQVES
ARDPSALLRAQFILQAQRKPQPTEPDQPW
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcgttgattttgctctacccacactggttaggattgttggtgcctctgttgttg
ctcgccgcttggcgagggctgcgccaaaaccaacggggattgattgcccctcatctcgcg
caagcgttggggattgaaactcgcacgcggcgctcttttgggggtgtattggtactcagt
tggatcgtcgccacccttgcgatggcgggcccaagctggcaatccgctgaacgtccgagt
gtgcaaaatagcgccgcacgtgtgttaattatggatatgtcacgctcaatgtacgcaacc
gacctaacgccaaaccgtttaacacaggcgcgttataaggcacttgatctcctaaaaggt
tggcaagaaggcagcacgggcttagtggcttacgccgctgatgcttatgtggtgagccca
ctgacgagtgacagtgcaacgctcgccaatctgctgccgaatctctccccagacatcatg
ccctatcaaggctcagatgccgctgccgcagtgagtttagcgatcaccatgctccagcaa
tcaggtcatcagcaaggggatctgattcttatcaccgatgatatgagtgtgacagaacga
gaaaaattgatctcgttgttacaaggtagcccatggcgtttggtgacgcttgcgatcggc
actcctagcggcgcgcccatccctttaggtgatggtagcctgctaaaagatcgtcaaggc
cagaccgtgattgccaaaaccgcatttgaccaattacagcagctctcacaacgcgttcaa
ggcgtgctgaccgcgtatcgtgcggatggcgcagatgtggcgcacatcctcagcctgact
cagcagccgattgatattgccgaatcgacttctcgtcaagccatcacggagcgcgtcaat
aacggttactggttagtcttgcccctcttgatcgccgctttatgtctatttcgccgtggt
gttattttcagcttactgctgcttttcggagtgagtttgcccaaccagcaggcttgggcc
tctgcatggttaaatcaagatcagcaagcgatgcgcatgttcaacaatgagcaatatgcg
caagccgctgaagcctttcgcgatccacgctggcaaggtgcggctcgttactatgccaaa
gattaccaaggagccattgacgcctattcgcaaatcgctaaccctgatactgccacgcag
tacaatctcgccaatgcttatgcgcaagcaggagagttacagaaagcgcaggatttgtac
gaacacgttctcaagcaagagccgaatcatcaagatgcacgacacaatttagacgtggtc
aaagctgcacagcaacagcaacagcaacagcaacagcaacagcaacagcaacagcaacag
caacagcaacagcaacagcaacagcaacagcaacagcaggattcgtcatctggctcctcc
ggtcaagaagcgcaagaagactcatcagcaaatccctcaaatacagctcaggagcaagag
gcgagctctcaaacaaaaggcgcatcgacgcctgatccacagcagggccaacaagagagt
aacgagcccaaagcgagtgcaaaaccacaggagcaaccaagcgctgtggatgatgcgcaa
gctggggaacccagcgcgcaccaggagcaatcaaaagatccgcaaaatgggcagccaagt
agaaccgagcaaaacggtgagcagagtgacaaagccaatgccgctcagtcctccgcgtcg
gtcacctcttctgatcccaatcttgaccctatgttacgtaagttggagcaagtcgagagt
gctcgcgatccgagtgcactactgcgcgcgcaatttattctgcaagcccaacgtaaacct
caacccacggaacccgatcagccatggtaa
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