Vibrio cholerae O49 1154-74: VAA049_2611
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Entry
VAA049_2611 CDS
T03828
Symbol
trmU
Name
(GenBank) tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
KO
K00566
tRNA-uridine 2-sulfurtransferase [EC:
2.8.1.13
]
Organism
vcx
Vibrio cholerae O49 1154-74
Pathway
vcx04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
vcx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
VAA049_2611 (trmU)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vcx03016
]
VAA049_2611 (trmU)
Enzymes [BR:
vcx01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.13 tRNA-uridine 2-sulfurtransferase
VAA049_2611 (trmU)
Transfer RNA biogenesis [BR:
vcx03016
]
Prokaryotic type
tRNA modification factors
Thiolation factors
VAA049_2611 (trmU)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_Me_trans
tRNA_Me_trans_C
tRNA_Me_trans_M
NAD_synthase
ThiI
QueC
Asn_synthase
ATP_bind_3
Arginosuc_synth
Diphthami_syn_2
Motif
Other DBs
NCBI-ProteinID:
AKB04827
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All DBs
Position
2894383..2895498
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AA seq
371 aa
AA seq
DB search
MSVEHSANSQKKVIVGMSGGVDSSVSAYLLKQQGYQVEGLFMKNWEEDDNEEYCTAAEDL
ADAQAVCDKIGIPLHTINFAAEYWDNVFEYFLAEYKAGRTPNPDILCNKEIKFKAFLEFA
DEVLDADYIAMGHYVRRTFPQNGEKPQMLRGLDGNKDQSYFLYTLSHEQVARSLFPVGEL
EKPEVRRIAEEQGLITAKKKDSTGICFIGERKFTDFLSRYLPAQPGKIETPEGKVIGEHQ
GLMYHTLGQRKGLHIGGMKESSEQPWYVADKDLKRNVLIAVQGADHPLLKSHGLVAAQLH
WVDRTPITEPVRCSVKTRYRQSDIACTIIPLSDDRIKVMFDEPQVAVTPGQSAVFYQGEI
CLGGGIIEERI
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtagagcacagcgcaaacagccaaaagaaagtgattgtcggtatgtctggaggg
gttgattcctctgtttcagcctatcttctcaagcaacagggttaccaagtggaaggcctg
tttatgaaaaactgggaagaagacgataacgaagagtattgtactgcggcagaagattta
gccgatgctcaggcggtgtgtgacaaaatcggcatcccacttcataccattaacttcgca
gcagaatactgggataacgtatttgaatacttcctcgcggaatataaggcgggacgtact
cctaacccagatattttgtgtaataaagagatcaaatttaaagccttcttagaatttgct
gatgaagtgctggatgcagactacatcgccatggggcactatgtgcgtcgcaccttcccg
cagaatggcgaaaaaccgcaaatgctgcgcggtttagacggtaataaagaccaaagctac
ttcctttatactctgagtcatgagcaagtggcgcgtagcctattcccagtaggtgaacta
gaaaaacctgaagtacgccgcattgccgaagaacaaggcttaattaccgcgaagaagaaa
gattcaaccggtatttgttttatcggtgagcgcaaatttaccgacttcttatctcgctat
ttgccagcccaaccgggtaaaattgaaaccccggaaggcaaagtgattggtgagcaccaa
ggcttgatgtaccacactctcggacagcgtaaaggtctgcacattggtggtatgaaagag
agcagcgaacagccatggtatgtggcggataaagatctcaaacgcaacgtactcatcgcg
gtacaaggcgcggatcatcccctcctcaaatcgcatggtttggtggcggctcagttacat
tgggttgatcgcacccccatcactgaacctgtacgttgcagcgtgaagacgcgttatcgt
caaagtgacatcgcttgtaccatcattccgctgagtgatgatcgcatcaaagtgatgttt
gacgagccacaagtggccgtgactccgggacaatccgccgtcttttatcaaggtgaaatc
tgccttggtggcggcattattgaagagcgcatttaa
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