Vibrio cholerae O27 10432-62: VAB027_3557
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Entry
VAB027_3557 CDS
T03829
Name
(GenBank) bacterial regulatory s, lacI family protein
KO
K06145
LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
Organism
vcz
Vibrio cholerae O27 10432-62
Brite
KEGG Orthology (KO) [BR:
vcz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vcz03000
]
VAB027_3557
Transcription factors [BR:
vcz03000
]
Prokaryotic type
Helix-turn-helix
LacI family
VAB027_3557
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Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_1
Peripla_BP_3
Peripla_BP_4
LacI
HTH_10
HTH_24
HTH_3
HTH_IclR
HTH_23
DUF2937
HTH_7
Sigma70_r4
HTH_Tnp_ISL3
HTH_31
Hpr_kinase_N
HTH_Crp_2
Motif
Other DBs
NCBI-ProteinID:
AKB06378
LinkDB
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Position
3855916..3856914
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AA seq
332 aa
AA seq
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MTKKQRATLQDVADQVGVTKMTVSRYLRSPDSVAAATREKIALAVEALGYIENRAPAMLS
KSSSKAIGILLPSLSNQIFASFVQGIEAVTKANGYETLLAHFGYDEEEEERKIASLLAYQ
VDGLILTESHHTQRTLQMIASSGVPVVETMELPANPIDMAVGMDHIEASYQAVKKIIAAG
KRSIAYFGARLDTRTKLRMQGYDQAMQEAGLPIKHVLTGSHSSFSLAAQLLDEAFARYPD
LDGVFCTNDDIAIGTLLVAQQRGIQVPEQLSVIGYNALDIGRTITPKLTSVDSPRYAIGE
KSAELLIAALKGERAEEHIVDMGYRFTAGESV
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaaaaacagcgcgcgacattgcaagatgtggcggatcaagttggcgtaacaaaa
atgactgtgtcgcgttatctgagaagcccggattccgtggctgcggccacgcgggagaag
atagcgcttgccgttgaggctttgggatacattgaaaatcgcgcccctgcgatgctttct
aaatcatccagtaaggcgattggtattttgcttccttcattatcgaaccaaatttttgcc
tcttttgtgcaagggattgaagcggtgaccaaagccaatggctatgaaaccctactcgcc
cactttggttacgatgaggaggaagaagagcgcaaaattgcttcgctgctcgcctatcaa
gtcgatggtcttattctcaccgaaagtcatcacactcagcgcaccttgcagatgattgcc
agctctggcgtgcccgtggtcgaaaccatggagctgcctgctaacccgattgatatggcc
gtaggtatggatcacatcgaagcctcatatcaagcggtgaaaaaaattatcgcggcgggt
aaacgttcgattgcctatttcggcgcacggcttgatacccgcaccaaactgcgtatgcag
ggctatgaccaagcgatgcaagaagccgggctgcctatcaagcacgtgctgactggctca
cactccagcttctctctcgccgctcagttgcttgatgaagccttcgcgcgttaccccgat
ctggatggtgtattctgcaccaacgatgacatcgcgattggtactctactggtggcgcag
cagcgtgggattcaggtgcccgaacagctttccgtgattggctataacgcgctggacatt
ggccgtaccatcacgccaaagctaactagcgttgattcgccacgttatgcgattggtgaa
aaaagcgctgagctactgattgccgcactcaaaggtgaacgcgctgaagaacatatagtg
gatatgggttatcgttttactgccggtgagagtgtgtaa
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