Varroa destructor (honeybee mite): 111243848
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Entry
111243848 CDS
T07383
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
vde
Varroa destructor (honeybee mite)
Pathway
vde03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vde00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111243848
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vde03041
]
111243848
Enzymes [BR:
vde01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
111243848
Spliceosome [BR:
vde03041
]
Complex A
U2 snRNP components
U2 related factors
111243848
Complex B
111243848
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
SecA_DEAD
THP2
Motif
Other DBs
NCBI-GeneID:
111243848
NCBI-ProteinID:
XP_022645791
LinkDB
All DBs
Position
Unknown
AA seq
1127 aa
AA seq
DB search
MGRSRSRSRERRRSRSPRDRRRSRSRDRKRKSRSRSKDKDKDIRDRRRDRSRERKRSRSR
SRDRRRERSRDRRRSRSRSRDRKRSKEQSRRSRTRSKSRSRSRSRSGDRILQATKMHDPV
ATALAILAPVTMPSSTNAAGLSVTTNSAILQQVPLPPAPPKEPAHVLEDFGLLDKDSKQQ
KLDAEMKKFRERIERERAEKKLKEVHKLKEDTDTIEILERQSEDAKTNDNNAKEGSDSAE
PAPPAKTPYKPPPGLALIDTDEEDNNDDGDDEDRSKKKKKETKMEEDDDDDDGVDPLDAY
MEEVVKEVRAITKAAPKPQTATNNLVHGIKGGQAVVLTGKQKGRPKSASGNSGKGDIMEQ
NEDGLEYSDEGEQEDLQQAMDSYSSATLGKIKKQTTISLDDITYQPFRKDFYIEVPELAQ
MTQAEVEAFRTEMDGITVKGKNVPKPIKAWPQAGISKKVLDVLKRANFDKPTPIQAQTLP
AIMSGRDLIAIAKTGSGKTLAFLLPMFRHILDQPPLEANDGPIAVIMTPTRELAMQITKD
CKKFTKALNLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNMRRCT
YVVLDEADRMFDMGFEPQVMRIIDSIRPDRQTVMFSATFPRQMEALARRILLKPIEILVG
GRSVVCKEVEQHVLILNEEDKFLKLLEILGKYTSQGSAIIFVDKQEHADALLKDLMTASY
NCSVLHGGIDQFDRDSTIVDFKNGKFNVLVATSVAARGLDVKQLVLVVNYDCPNHYEDYV
HRCGRTGRAGNKGFAYTFIAPDQERYTVDILKALELSEAPVPDELQKLFNTYKEKMEAEG
KKVKGSSGFSGKGFKFDESEANFTSEKKKYQKAMLGMNDSDDDDAEDSIDQDIETMMAPK
KRVTETKGPAGGPPPPLHGQTHPSAAEASVPLVPSQPIIPAVLPTDPLEKAKFLARRINK
QFSQENRSDDPNGPRPGGAAPNSSIAAQIARSIAEQRAERLHIKLNYTPSGESDPLITSE
QTTFRKYEEELEINDFPQQARWKVTSKEAIAQIAEYSEAGLTVRGTYFPPGREPPEGERK
LFIAIESHDEMSVQKAKSEIVRLIKEELVKLQHSSYQPMNRGRYKVL
NT seq
3384 nt
NT seq
+upstream
nt +downstream
nt
atgggacgctctcgatcgcgttcgcgcgagaggcgtcgctcccggtccccacgcgaccgc
cgacggtcgcgttcaagggatcggaaaagaaagtctcggtcgcgtagcaaagataaagat
aaggacattcgcgacaggcgaagggatcgttcaagggaacgcaaacgttcgaggtccagg
agtcgggacaggcgccgtgagcgaagtcgtgacagacgtcggtcccgctctcgttcgcgc
gatcggaagcgatcaaaagagcaatctcgtcggagtcgcacgagaagtaagagtcgttct
cgctcgaggtcacgaagcggcgatcgaatattgcaagcgacaaaaatgcacgaccccgta
gcaacggcattggctatcctcgccccggtaaccatgccctcgtctaccaatgctgctggt
ctgtcggtgacaacgaacagcgccatacttcagcaggtacctttaccgccggctccaccg
aaagaacccgcgcacgtgcttgaagacttcggcttgctcgataaagattcgaagcagcag
aagctcgacgccgaaatgaagaaattccgtgagcgtattgaacgtgagcgtgctgaaaag
aaattgaaggaggtccacaagttgaaagaggacactgataccatcgaaatattggaacgg
caaagcgaggacgccaagacaaacgacaataatgccaaagagggctccgattcggcagaa
cctgcaccaccggcaaagaccccatataaaccccctccgggactggcgcttattgatacc
gatgaggaggataataatgatgacggagatgatgaggacagatccaagaagaagaaaaaa
gaaacgaaaatggaagaagatgacgatgacgatgatggagtcgacccgttagacgcctat
atggaggaggtggtcaaagaagttcgtgctatcactaaagctgctccgaaaccacagacg
gcaacgaataacctggttcacggcatcaagggaggccaagctgtagtactgactggcaag
caaaaagggcgacctaaaagtgctagcggtaattccggaaagggtgatataatggaacag
aatgaagatggtctggaatattccgacgagggcgaacaagaggatctacagcaagcaatg
gattcgtattcctccgccacgctcggaaagatcaagaaacaaacaactatcagtttagat
gatataacgtatcagccatttcggaaagatttctatatcgaagtccctgagcttgcgcaa
atgacccaagctgaagtggaggctttccgaacagagatggatggtattacggttaaaggt
aagaacgtcccaaagcccatcaaggcctggccccaagctggaatcagcaagaaagtttta
gatgttttgaagagggctaattttgataagccaacacctattcaggcccaaacgttaccc
gccattatgtccggacgagatcttattgctattgcaaaaacaggttcaggaaagacgcta
gcgttcctcttgccaatgtttcggcacatcctggatcagccgccgctcgaagctaacgat
ggcccgatagcagtgattatgactcccacgagagagctggctatgcaaatcacaaaggat
tgcaaaaagtttactaaggctttaaatcttcgcgttgtatgcgtctacggtggaacaggc
atctcggagcagatagcagaattgaaacgtggtgctgagattatagtctgcacaccgggt
cgcatgatcgacatgttggccgccaacagcggtcgcgtcacgaatatgcgcaggtgcacg
tacgtggtgcttgatgaagctgatcgtatgtttgatatgggtttcgagcctcaagttatg
cgtattattgacagcattcggccagatcggcaaacggttatgttctcagcgaccttcccc
cgacaaatggaagctttagctaggcgaatactattaaagccaatcgaaatacttgttggc
gggagatcagttgtctgcaaggaagtcgagcagcacgttcttattttgaatgaggaagac
aaattcctcaagcttcttgaaatactcggcaaatacacatctcagggtagcgcaattatc
tttgtcgacaagcaagagcatgctgacgctttactcaaggatctcatgactgcatcatac
aattgttcggtgctccatggaggaatcgatcagtttgatcgagattcgacgatcgtcgac
ttcaaaaatggcaaatttaacgttctggtcgcgacatccgttgcggcccgaggcctggat
gtgaagcagcttgttctcgtagtcaactatgactgtcctaatcattacgaagattacgtg
catcgctgcggccgaacaggcagggcaggcaacaagggctttgcttacacatttattgca
cctgaccaggagcggtacaccgtagacattttgaaggcgcttgagttgtcggaagcaccg
gtaccagacgagcttcagaagctgttcaatacttataaagagaaaatggaagctgagggc
aagaaagtcaaagggtcatctggtttctcaggcaaaggcttcaaatttgatgagagcgag
gcaaactttactagcgaaaagaaaaagtaccagaaagccatgctaggtatgaacgattcg
gatgatgatgacgcggaagattcgattgatcaagatatcgagacgatgatggccccgaaa
aaacgtgttactgagacaaagggtcccgcaggaggaccgccaccccctctgcatggccaa
acgcatccatcagcagcggaggcaagtgttccgctggtcccatcgcaacccataattcct
gccgtccttccaacagatccgttggaaaaggcgaagtttttggctagacgcattaataaa
caattttcccaagagaaccgatcggatgatcctaatggacctcgtccaggaggcgccgct
cctaacagcagtattgctgctcagatagctcgcagtatcgctgaacagagagcggaacgt
ctgcacatcaagcttaactatacgcctagtggagaatcagatcctttgattaccagtgaa
caaacaacattcaggaagtatgaggaggaactcgaaatcaacgactttccacagcaagca
agatggaaggtaacgtctaaagaggctatcgcacagatcgccgaatactcagaggcagga
ttgaccgttcgtggtacgtatttcccacccggccgagaaccaccggagggcgaacgcaaa
ctgtttatcgcgatcgaatcccacgacgaaatgtccgtccaaaaggcgaagtcagagata
gtgcgtcttatcaaagaggagctcgtcaaattgcagcattcatcgtaccagcctatgaat
agagggcgctacaaagtcctttaa
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