Varroa destructor (honeybee mite): 111246477
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Entry
111246477 CDS
T07383
Name
(RefSeq) regulator of nonsense transcripts 3A-like
KO
K14328
regulator of nonsense transcripts 3
Organism
vde
Varroa destructor (honeybee mite)
Pathway
vde03013
Nucleocytoplasmic transport
vde03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
vde00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
111246477
03015 mRNA surveillance pathway
111246477
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vde03019
]
111246477
Messenger RNA biogenesis [BR:
vde03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
111246477
mRNA cycle factors
P-body specific factors
111246477
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg4_UPF3
Motif
Other DBs
NCBI-GeneID:
111246477
NCBI-ProteinID:
XP_022651881
LinkDB
All DBs
Position
Unknown
AA seq
743 aa
AA seq
DB search
MTQDEKDKSDNVKVLKTSGDKRSKSRRGRVLKVVIRRLPPSMCEDDFVEQVSPLPEHDSF
YFVPADNSMHSSMSGHSFSRAYIAFRDHQEVVNFRDKWDGYVFLDERGQDYPAIVEFAPF
QKMPRKKPKKADIKNGTIEQDAEFQKFIETMDVEEEVDLPSLEATVEELERRDRELRANN
GVPNVVTPLIEFVLAKKMEKVRMREERREEKKRKDAERKRGDKRRQKREHAVRMARESTI
REESDEDAMSVEDDFHRMDIRQRIEDPHSNGRGADRDRGIHRDKATGGGGGDRGAERSGE
GIREKTGRRERNRRGNKENKKGQNTKTNQNNAGYHQSDTNKNRGVNDDDEVSGPSPVGGR
QSGPRDKSELYRDHGEGVDRHAKYYNDPREPKSCNQRRNARAHDGEGDHYADEPKPPRRE
KKGRDRDRTRDRGKGGNGNDTNNRGENRRNRGNDKDDRRDLSQRDEERWPSDDKVEGIES
RKHVDKDDRPGDHKEDRRTRGEDRDRIDRDNHRDSAGTSAVDKEDRAISGATRGGDQRDR
EERSDRRERADRNERSDRRNEKGDNHKKGNQRERRENNRKKDNNDKDGEYRDGGAGGGAK
ARPPKISGGRSGGDRREDRASTAATKKDQPKVSKRYSDTRPVPLGKSKLLSGDGDDVTGE
ENSTRRPGDFDESPGETRASCHSREQHELRPIPRPSQKDDAAVGVKKIRNKFRPSLEIYK
PGSGRKKSEPDREGKSSSPDPAQ
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atgactcaagacgaaaaagataagtctgacaatgtcaaggtactgaagacaagcggcgac
aagcgctcgaaatcgcgcaggggccgtgtcctgaaggtggtgattcgccggttgccgccg
tcgatgtgtgaagatgattttgtggagcaagtatcccctcttccagagcacgattcattt
tacttcgtgcccgcagataatagcatgcatagtagcatgagtggccacagttttagccgc
gcgtacattgcctttcgtgatcatcaggaggttgtgaattttcgagacaaatgggacggc
tatgttttccttgatgaacgcggacaagactaccctgcgattgtagaatttgctccgttt
caaaagatgcctcgcaaaaaacccaagaaggccgatatcaaaaatggaacgattgaacag
gatgcggaatttcaaaagtttatagagacgatggatgtagaggaagaagttgatctaccg
tcgctagaggcgacggtcgaagaactcgagcgacgcgatcgtgagttacgcgccaacaat
ggagttcccaacgtggtcacaccacttatagaattcgtactagccaaaaagatggagaag
gtccgaatgcgcgaagagcgccgtgaagaaaagaagagaaaagatgccgaacggaagcgt
ggtgataaacgacgccagaaaagggaacatgcagttaggatggcgcgagagagcacaata
cgtgaggaatcggatgaggatgcgatgtcagttgaagatgatttccacagaatggatatc
cggcagcgtattgaagatccccactcaaacggaagaggagctgatcgtgacaggggtatt
catagagataaagcgacaggtggagggggtggtgaccggggagcggaaaggtctggagaa
ggaatcagagagaaaactggaaggagagaaagaaatcgtcgtggcaataaagaaaataag
aaaggtcaaaacaccaagactaaccagaacaatgcgggttaccaccagtccgacactaac
aagaacaggggagtcaatgatgatgatgaagttagcggtccttcgccagttggtgggcgc
caaagtgggccccgtgacaaatctgagctttacagagatcatggtgaaggcgtcgaccga
cacgccaaatactacaatgatcctcgcgaaccgaaatcatgtaatcaaagaagaaatgct
agggctcacgacggcgaaggagatcactatgcagacgagccaaagcctccaagacgagag
aaaaagggtcgagacagggataggactagagatcgggggaaaggaggtaacggaaatgac
accaacaatcgcggcgaaaacaggagaaatcgagggaatgataaagacgatcgaagggat
ctgtcacaaagggatgaagaacgatggccaagtgatgacaaagtcgagggaatcgaaagt
cgaaaacatgtcgataaagacgataggccaggcgaccacaaagaagatagaaggacacgg
ggagaagatcgagatcggatagatagagacaatcatcgtgattcggcgggaacatcagcc
gttgacaaggaggatcgagcgatcagtggagcgacacgtggaggcgaccagcgagatcgt
gaagaacgttcggatcgacgagaacgagctgatcgaaatgaacgttctgatagacgaaac
gagaaaggcgacaatcataaaaagggtaatcagagagaacgacgagaaaataatcggaag
aaagataacaacgataaagatggggaatatcgtgacggaggagctggaggtggtgcaaag
gctaggccaccgaaaataagcggcggacgaagcgggggtgatcgaagggaagacagagca
tcgactgcggctactaaaaaggatcagccaaaagtctcgaaacgttactcggatactcgg
ccagtgcctttaggaaaatcgaagttgttgagtggagatggagatgatgtaacgggagaa
gagaattccacaagaagaccgggtgatttcgacgagagtcccggggaaacacgtgcgtcg
tgccatagtcgtgaacaacatgagctgaggccgattccgcggccatcgcaaaaagacgat
gctgcggttggtgttaagaagatacggaataagtttcgtccgtcactggaaatttataaa
cctggaagtggaagaaaaaaaagtgaacctgaccgagaaggaaaatcatcatctcctgac
cctgcacaatag
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