Varroa destructor (honeybee mite): 111255345
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Entry
111255345 CDS
T07383
Name
(RefSeq) general transcription factor IIF subunit 1-like isoform X1
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
vde
Varroa destructor (honeybee mite)
Pathway
vde03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
vde00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
111255345
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vde03021
]
111255345
Transcription machinery [BR:
vde03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
111255345
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIF_alpha
Motif
Other DBs
NCBI-GeneID:
111255345
NCBI-ProteinID:
XP_022672957
LinkDB
All DBs
Position
Unknown
AA seq
606 aa
AA seq
DB search
MSRPVGPLNGPPKPAVVSSQEFIVRIPKATKRRHHVMRFMQSRNQTPLEWSQVRMERENN
LKEYRTESDELPKYGAGSEYGRELKDEARRKKFGIVRKKYNPDDQPWHLRVGGKQGKKFK
GIREGGVMENASYYVFSKAPDGVFEAYPVDEWYNFTPIQRYKALTAEEAEDAYSQRDKII
NHFAIMVKKRLAEAQGTTFEEDKDGASTKEPGSSSKKSRESLKLTDMDDWHGDSDFSGAE
SGGDNAEEEAAKKKKKRKDQKKKDKKSQESDSSAQEESDEGDFDGREVSYMTSGSESSGD
EPEDEKVNKQLKGVEDEDALRQLVLSDEDDDEDDENKKDEDDENKNEEDGDKTGDGKGKD
GKKSSGGDKDSGGKGGSDRGANKNSAGGGKSSDESSSENSDSDLDDSRLLGSSAVFMQGK
RKDGGSRSGTPTKDVINGTNGILKKVKAPGGSIKRKKEETPTKEGQGTSTQGPSQHGTQQ
SHLPSAGLEQATKKPKIELNLGINLNNGGSSSSSNNSSTVATVGPSGSRGGVDNTPLAQV
EGINEEAVRRYLMRKPMTTTELLQKFKSKKTGLTSDQLVNLIAQILKRLNPEKQKIKDKL
YLSIRQ
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgcccggtaggcccacttaatggtccgccaaaacccgcagtagtgagctcccag
gagttcatagttagaattccgaaagccaccaaacggagacatcatgttatgcgcttcatg
cagagtcggaaccaaaccccattggaatggagccaagtccgcatggagcgcgaaaacaat
cttaaagaatatcgcacggagtcggatgaactccccaaatatggagcaggctctgaatat
gggcgtgaactaaaagatgaagctaggcgcaagaaattcggaatagttcgcaaaaaatac
aatccagatgaccagccatggcaccttcgggttggcggaaagcaagggaagaaatttaaa
gggatccgtgaaggtggagtaatggaaaacgcgtcgtactacgtcttttctaaagcaccc
gatggcgttttcgaagcatacccagtagatgaatggtacaatttcactcctatacagcga
tacaaggctttgactgccgaagaggccgaggacgcgtatagccagagagacaaaatcatc
aaccatttcgctatcatggtcaaaaagcgattggctgaagcgcaaggaacaaccttcgag
gaagataaggacggggcctctaccaaggaaccaggatcttcttccaagaagagtcgcgag
agcctcaaactgacggacatggacgactggcatggtgactctgacttctccggcgctgag
tccggtggcgacaatgcagaagaagaagctgctaaaaaaaagaaaaaacgaaaagaccag
aaaaagaaggacaaaaaatctcaagaaagcgattcgtccgctcaggaagagtccgatgaa
ggagatttcgacggtagagaagtgagctacatgacttcgggaagtgagtcatccggagat
gaacccgaagatgagaaagtcaacaaacaactgaaaggagtggaagacgaagatgctctt
cgacagttagtactctctgatgaagacgacgatgaagatgatgagaacaaaaaggacgaa
gacgacgaaaataaaaatgaagaagacggtgacaagactggtgatggaaaaggaaaagat
ggcaaaaaaagttcaggcggggacaaagattccggaggcaagggtggtagtgaccgtgga
gccaataaaaattcggctggaggtggtaaaagttcggacgaaagctcgtcagaaaattcc
gattcggatcttgacgactcacggttactaggaagcagcgctgtttttatgcagggaaaa
cgcaaagacggaggctcgcgttcaggaacgcctactaaagatgtcattaacggaacaaac
gggattttgaaaaaagtgaaagctcccgggggatctatcaagcgcaagaaagaagaaaca
cctacaaaggaaggacagggtacatctacgcaaggaccgtcgcagcatgggactcagcag
tcacatttaccaagtgccggcttggagcaagcaacgaagaagccaaaaatcgaactgaac
ctcggaatcaaccttaataacggtggcagcagtagcagcagcaacaacagttcaacggtt
gctactgtaggcccctcagggtctcgtggaggggttgacaacactccgctggcgcaggtc
gaaggaattaacgaagaggccgtgcgaaggtatctcatgcgaaagccgatgaccacaacg
gagcttctgcagaagttcaaatcaaagaaaactggcctcacctcagatcagttggtcaac
ctaattgcccaaattcttaagcgcttgaatccggagaagcagaaaatcaaagacaaactt
tacctatccatcaggcaataa
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