Vulcanisaeta distributa: Vdis_1188
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Entry
Vdis_1188 CDS
T01313
Name
(GenBank) SMC domain protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
vdi
Vulcanisaeta distributa
Brite
KEGG Orthology (KO) [BR:
vdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vdi03400
]
Vdis_1188
DNA repair and recombination proteins [BR:
vdi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Vdis_1188
Archaeal homologous recombinant proteins
Vdis_1188
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
AAA_13
AAA_21
Rad50_zn_hook
AAA_29
NADH-G_4Fe-4S_3
Mce4_CUP1
Uteroglobin
Fib_alpha
AAA_27
DUF6827
Mut7-C
MCPsignal
She9_MDM33
SKA2
AAA_16
AAA_22
BLOC1_2
DUF6011
IBD
FapA
Occludin_ELL
GAS
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
ADN50574
UniProt:
E1QR04
LinkDB
All DBs
Position
complement(1132635..1135115)
Genome browser
AA seq
826 aa
AA seq
DB search
MRVKVRISELTIRDFRGFRGEHRVVFNDGINIIHGPVGSGKTSIVQAIEYALYGTQLEVK
ERVSKLADLINEDSNSSLVKLVLTNGVEIVRELKRSGETARESPIAMINGTRYKGDDVNP
KIIEFLGVDDDDFERFVLVTHRTLEALVYGSITKRSIFIDKLFGLEILDNLNKSLPMSQL
EELINRLRQRLASVKELPEIIVKYGSIEKAREKVRELREEIDKLRKEEEELSNTYNDLLK
RREEILKNFKGVEEVYSNYIAIRIRRENLEQELERVGVKEVNETSIRLRLERLRDSLIEK
LEEYALVKEADEVSKLVITNDNLAEAAENIYKAFEELAKLKDKLVEDREYLSNVRNDLEI
QSESLKASLRELEARLSQEESRVREYRALVSKYGEPIKVRKDIEELRSRLEKLSSEESFR
ISLLNVLQYILSNHEERCPVCNRPLSEEDYENIKRRIEELSKGRNDEIEEIRNKLNELEK
VLTNMETLLPIVNDYEATVERARDVRSRFEAVVSKLETIERSIRDIDRRIQALTRFVDEF
RAEIDDIDRAISYLRKYRELNSLKQQEEELRQQLSNLGIDTKTVTSIEDQIRYLDERLTQ
VRAKLGDDSAELSRLELALSSLGFDKEDPSVLRRRLDFLEDFYNRLVRIRAGIREVQARV
RDEMIKIVRDNVGAIFKLLYPYNDLEGAGIEVTVRDRGVVGVVSEYTLYAIRPGGRKVTI
SRLSDGQRLTITLSFLLSVYRATNHNVDFLLMDEPIPYVDVNIRRAFAALLTRFVSEGLV
GQVIITTQSEDLVNDIVKAAEETNVKYSVIRLIKEGNERRIIQGTD
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
gtgagggtgaaggttaggattagtgaattaaccattagggacttcagggggtttaggggc
gagcatagggttgtctttaatgacggtattaacataatccatggacccgttggctccggc
aaaacaagtattgttcaggcaattgagtatgcactctatggaactcaattggaggttaag
gagagggtttcaaagctggctgacttaataaatgaggactcgaattcttcactcgttaag
cttgtacttacgaatggtgttgagatagttagggagcttaagaggtctggtgaaacggcg
agggaaagccccatcgccatgattaacggcactaggtataagggtgatgatgtcaatccc
aagatcatagagttcctgggcgttgatgatgatgactttgagaggttcgtgctagtcaca
cataggacccttgaggcgttagtctatggtagtatcacgaagaggagcatattcattgat
aagttatttgggcttgagattctcgataatttaaataagtcattacccatgtctcagctt
gaggaattgattaatagacttaggcagagactcgccagtgttaaggagctccctgaaata
atagttaagtacggctccattgagaaggcgcgggaaaaggttagggagttgagggaggaa
attgataagttgaggaaggaggaggaggaactcagcaatacatacaatgacttactaaaa
aggagggaggaaatactgaagaactttaagggtgttgaggaggtatatagtaattatatc
gctattaggattaggagggagaaccttgagcaggagcttgagagggtgggcgttaaggag
gttaatgagacgagcattaggcttaggcttgagagacttagggattcgttaattgagaag
cttgaggagtacgcacttgttaaggaggctgatgaggttagtaaattagtgataactaac
gataacctagccgaggccgccgagaatatatacaaggcctttgaggagctcgccaaactt
aaggataaactggttgaggatagggagtaccttagtaatgttcgtaatgatctcgagatc
cagtccgagtcattgaaggcatcacttagggagcttgaagcgaggctttcacaggaggag
tccagggttagggagtatagagcattggttagtaagtatggcgagccgattaaggttagg
aaggacattgaggagttgaggagtaggcttgagaagcttagttccgaggagagctttagg
atatcgttactaaatgtcttacagtacatactgagtaatcatgaggagaggtgccctgtc
tgcaataggccgttaagtgaggaggattatgagaacattaagaggaggattgaggagtta
tcgaaaggtcgtaacgacgaaattgaggaaataaggaataaactgaatgagctggagaag
gtattgacaaacatggagaccctgttacctatcgttaatgattatgaggccaccgttgaa
cgtgcgcgggatgtcaggtccaggtttgaggctgtggtctcaaagcttgagacaattgag
aggtccattagggatattgataggaggattcaggcgcttacgaggtttgttgatgagttt
agggctgaaattgacgatattgatagggcaatttcatacctaagaaagtatagggagctt
aattccctgaagcagcaggaggaggagcttaggcagcaactcagtaatctcggtattgac
acgaagaccgtaacaagcattgaagaccagattaggtatctcgatgagaggttaacccag
gttagggccaaattaggtgatgactcagcggagttaagtaggcttgagcttgcactgtcg
agccttggcttcgataaggaggacccatcagtactcaggaggagacttgacttccttgag
gacttctataacaggctggttaggattagggctggtattagggaggttcaggcaagggtt
agggatgagatgattaagattgttagggataacgttggcgcaattttcaagctgctatac
ccatacaatgaccttgagggggcgggcattgaggttacggttagggataggggcgttgtt
ggggtggtcagtgaatatacgctctacgccatcagacctggcggtaggaaggttacaata
tccaggttgagtgatgggcagaggctgacaataaccctctcattcctattgagtgtttat
agggccactaatcataatgtcgacttcctgctaatggatgaaccaataccttacgttgac
gtgaacattaggagggcctttgcggcattattaaccaggttcgttagcgagggcttggtt
gggcaggtaataatcacgacacagtcggaggatttggttaatgatattgtgaaggcggct
gaggagactaatgttaagtatagtgttatcaggcttattaaggagggtaatgagaggagg
attattcagggaaccgattaa
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