Verrucomicrobium sp. GAS474: SAMN05444156_0636
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Entry
SAMN05444156_0636 CDS
T09813
Name
(GenBank) porin, OprB family
KO
K07267
porin
Organism
veg
Verrucomicrobium sp. GAS474
Brite
KEGG Orthology (KO) [BR:
veg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
veg02000
]
SAMN05444156_0636
Transporters [BR:
veg02000
]
Other transporters
Pores ion channels [TC:
1
]
SAMN05444156_0636
BRITE hierarchy
Motif
Pfam:
OprB
BBP2
Motif
Other DBs
NCBI-ProteinID:
SDT90817
UniProt:
A0A1H2E6S8
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All DBs
Position
I:739772..741121
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AA seq
449 aa
AA seq
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MKNILGASAIFWSLLCGSECTLFASENSPTDSSPPVTATRSSDSIPKSIWEGNTLTGNWG
SLRPKLADRGVTVAPSLVGEDFGNIHGGIRKGNVGNGLFSLLLDVDTAKLTGWHGGGIFH
TNFLYAFGPNLDRTDVGDIATLSNISAYNTPHIQELWYQQPFCRQNATIKVGWIAADSEF
FTSSSSSVFIDSDFGTLPLLSANDPYGLPIYPIAAPGVRLRVQPNPSLYYQGAVFSGNPG
SATQNVNGLDFRISGKTGVFIINEVGYLLNQGQDDKGLAGAYKIGSFVHTGQFHTWSSQA
DSALNGGLLDEQGPDFGIYAVIDQQVWKEESKILSVFARGGYAPSDINVVNPYIDMGLNL
IGFVPRRDNDVAGIGLARSFISGPYSAFNQAANGAASTMTAETVIEATYKFQIAPWWTIQ
PDFQYIFTPSAVNGSRDAAILGLRTSVVF
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaaacattcttggtgcatcagctattttttggagccttctttgcggctcagaatgc
actctttttgcgagtgaaaattcgccaaccgattcttccccgcctgttacggcgacccga
tcttctgactcgatccccaaatcgatctgggaagggaacactcttaccgggaattggggc
agcctgcgtccgaagcttgccgaccggggcgtcaccgttgcgccttctctggtaggtgag
gacttcggaaacatccatggcggaatccggaaagggaacgtgggcaatggactcttctcc
cttcttctcgatgtagatacggcgaagctgaccggctggcatggcggaggcatcttccat
acgaacttcctctacgccttcgggccaaatcttgaccggaccgatgttggcgacatcgcc
accctcagcaacatcagcgcctacaatacgcctcacattcaggagctttggtaccaacag
ccgttttgcaggcagaacgcaacgataaaggtcggatggatcgcggccgactctgaattt
ttcacttcctcctcctcgtccgttttcatcgatagcgactttggcactcttccccttctt
tcggcaaacgatccctacggcctcccgatctatccaatcgctgctcccggcgtcaggctt
cgcgtccaacccaatccgagtctttattatcaaggagccgttttcagcggtaatcctggt
tcagccacccagaacgtgaacggtctcgatttccggatcagcggcaagacgggagtcttc
atcataaatgaagtgggctatctcctcaatcagggtcaggatgacaagggtcttgccgga
gcctacaagatcggttcttttgtccataccggtcagttccacacttggagttctcaggcc
gacagcgccctcaacggggggctgctcgacgaacagggacccgattttggtatctatgcc
gtcattgatcagcaggtttggaaggaggagagcaagattctttccgtgttcgcccgaggc
ggctatgcgccctcggacatcaacgtcgtgaatccctacattgatatgggattaaatctg
atcggcttcgtgccgcggcgggacaatgatgtggccgggatagggttggcgcgctcattc
atcagcggcccttattcggccttcaatcaggcggcaaacggggccgcctcgacaatgaca
gccgaaaccgtcatcgaggcgacttacaagtttcagattgcgccgtggtggacgatccag
cctgattttcagtacatcttcacaccgagcgcggtcaacgggtcgcgcgatgcggcgatt
ctcggccttcgaacctcggtggtgttttag
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