Verrucomicrobium sp. GAS474: SAMN05444156_1794
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Entry
SAMN05444156_1794 CDS
T09813
Name
(GenBank) porin, OprB family
KO
K07267
porin
Organism
veg
Verrucomicrobium sp. GAS474
Brite
KEGG Orthology (KO) [BR:
veg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
veg02000
]
SAMN05444156_1794
Transporters [BR:
veg02000
]
Other transporters
Pores ion channels [TC:
1
]
SAMN05444156_1794
BRITE hierarchy
Motif
Pfam:
OprB
Motif
Other DBs
NCBI-ProteinID:
SDU07175
UniProt:
A0A1H2FIM5
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All DBs
Position
I:2129881..2131260
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AA seq
459 aa
AA seq
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MKQHAFPAVAVLGLAFQLLSLPVFAGTEVVSTKAGAQASTAPSTEADDLWHRDTLLGELG
GYRTKLSDHGIVITPLFTAELMGNLGGGSGAGYSSGGVGRGLGYAGLLNVPVDVDLSKMV
DGWKGATFHVNGLWTSGPGLSPPYLGDIGNTSNIQAYNTVRLQELWFQQTFLEEKLSLRV
GEMAADAEFFTTSTGALFLNSTFGAFTLLSANLTNPYNPPSYPMAAPGVRLRAQPRSDVY
VMAGIYDGNTESQTANKHGTDFHLNSESGAAIFTEAGYLLNADHAERLQGAYKFGSFVHT
HNWNSWQSQAAAAAGTGTKVSGGVDALLYGVIDQQVYRRGDAAISVYTRAGHGSADRNAV
DWYVDGGFNFAGFVPDREKDVFGVAVTRSSFSGNYSDYQLTTGAAANPYVAETTIEATYR
FQLTPWWTLQPDYQHIFTPGGIDGAKDADVLGLRTSVAF
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgaaacagcatgccttccctgcggtggcggtcctcggcctggctttccagctcctttcc
ctccccgtcttcgcgggaacggaggtggtaagcaccaaggcaggagcccaagcctcgacc
gccccctccaccgaggcggacgacctctggcaccgggataccctcctcggcgagctcggc
ggctaccgtacgaagctctccgaccacgggatcgtcatcacccccctcttcacggccgaa
ctgatggggaatctcggcggcggttccggtgcgggctacagcagcggcggcgtcgggcgg
gggctcggttatgccgggctgctcaacgtccccgtcgatgtcgatctcagcaagatggtc
gacggctggaagggggcgacgttccacgtgaacggcctctggaccagcggcccgggcctc
agccccccctacctcggtgacatcggcaacacgagcaacatccaggcctacaacaccgtc
cgcctccaggagctttggttccagcagaccttcctggaggagaagctctcgctgcgggtc
ggggagatggcggccgacgccgagttcttcaccacctcgacgggggcgctcttcctgaac
tcgaccttcggggccttcaccctcctcagcgcgaacctcacgaacccctacaatccgcct
tcctacccgatggccgcccccggcgtccgcctccgggcccagccccgctccgacgtctac
gtcatggccgggatctacgacgggaacaccgagagccagaccgcgaacaagcacggcacc
gacttccacctgaacagcgagagcggcgcggcgatcttcaccgaggcgggctacctcctc
aacgccgaccatgccgagcgccttcagggagcctacaaattcggctccttcgtccacacc
cacaactggaactcgtggcaatcccaggccgccgccgccgcggggaccgggacgaaggtc
agcggcggggtcgacgccctcctttacggggtgatcgaccagcaggtctaccgccgggga
gacgccgcgatttcggtctacacccgggccggacacggcagcgccgaccgaaacgcggtc
gactggtacgtcgatggaggcttcaacttcgccgggttcgtccccgaccgggagaaggat
gtcttcggcgtcgccgtcacgcggtcgagcttcagcgggaattacagcgattatcagctg
accaccggggccgccgcgaatccctacgtcgccgagacgacgatcgaggcgacctaccgc
ttccagctgacgccgtggtggaccctccagcccgactaccagcacatcttcacccccggc
gggatcgacggcgcgaaggacgccgacgtcctcggcctccggacgagcgtggcgttctga
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