Vibrio sp. EJY3: VEJY3_05860
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Entry
VEJY3_05860 CDS
T01683
Name
(GenBank) helicase-like protein
KO
K19789
DNA repair protein RadD
Organism
vej
Vibrio sp. EJY3
Brite
KEGG Orthology (KO) [BR:
vej00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vej03400
]
VEJY3_05860
DNA repair and recombination proteins [BR:
vej03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
VEJY3_05860
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
Helicase_C
DEAD
SWI2_SNF2
AAA_22
SLFN-g3_helicase
DZR
AAA
zf-tcix
ERCC3_RAD25_C
FAD_binding_4
zf-ribbon_3
Motif
Other DBs
NCBI-ProteinID:
AEX21666
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Position
1:complement(1316393..1318144)
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AA seq
583 aa
AA seq
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MYTLRPYQADSVKAVIHYFRKHSTPAVIVLPTGAGKSLVIAELARLAKGRVLVMAHVKEL
VEQNHAKYEGYDLQGSVFSAGLGRKETDQQVVFASVQSVVRNLDAFKNQFSLLVIDECHR
VPDDKNSSYQKVITHLRELNPGIKVLGLTATPYRLGMGWIYQYHTRGQVRTEEPRFFRDC
IFELPIRYLLDENFLTPARMMDAPVLSYDFSQLKPANTGRYKEAEMDMVIDKAKRATPQI
VEQIIQYAKDRHGVMIFAATVRHAQEIHGLLPEGQTAIVIGDTPTPERDAIIQAFKNREI
KYLVNVSVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRLSEGKSECLVLDYAGNSY
DLYQPEVGDPKPDSTSEIITIPCPACGFNNNFWGKLDSNGFLLEHFGRRCQGYFEDEDTG
EREHCGYRFRAKYCGECGADNDIAARICHECDATLVDPDKKLKEALNLKDALIFECTEMD
LSVFKPNDGKSQLKVTYSGEPYQGEGNALVHEFWSLTTKKQKQNFKDQFVRPHLADKHRP
FEETSPTRVVANQHRFRLPQFVIARKSGRFWKLRDKIFDGELK
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgtatacacttcgcccctatcaagctgactctgtaaaagcggtcattcattactttcgt
aaacactcgacacctgccgtgattgtgttgccaactggtgcgggcaaaagcctggtgatt
gccgaattggctcgtctggctaaagggcgagtgttagttatggcgcatgttaaagagctg
gttgagcaaaaccatgccaaatacgaagggtacgatctccaaggctcggttttttctgct
ggccttggacgcaaagaaaccgatcagcaagttgtgttcgcttctgttcagtcggtggta
agaaacttagatgccttcaaaaaccaattctcgctactggttatcgacgaatgtcatcgc
gtgccagacgataaaaacagcagctatcagaaagtgattactcatttgcgtgagttgaac
ccagggattaaagttcttggtcttaccgccaccccatatcgattgggcatgggttggatt
taccagtaccatactcgcggacaggttcgaactgaagaaccgcgcttcttccgcgactgc
atctttgaattaccaattcgctacttgctcgatgaaaacttcctgacgccagcgcgaatg
atggacgcgcccgttttgtcttatgacttttcgcagttaaaacccgccaataccgggcgc
tacaaagaagcggaaatggacatggtgatcgacaaagccaaacgtgctacgccgcaaatc
gtcgaacaaattattcaatacgcaaaagaccgacatggtgtgatgatttttgccgccacg
gttcgtcacgcgcaggaaattcatggtttattacctgaaggccaaaccgcaattgtcatc
ggagatacgccaacaccggagcgtgacgccatcatccaagcgtttaaaaaccgcgaaatc
aagtatctggttaacgtgtcggtattaaccactggatttgatgcaccgcacgttgatctg
attgccattttgcgtccgacagaatcagtcagtttgtatcagcaaatcgtcggccgcggg
ctacgtctgtcagaaggtaagtcagaatgtttggtgcttgattacgcaggcaacagttac
gatttgtatcagccagaagttggcgatcccaaacccgattccaccagcgagatcattacc
attccctgccctgcttgtggttttaataacaacttctggggcaaattggatagcaatggc
tttttgctggaacacttcggccgccgttgccagggttacttcgaagatgaagacacgggt
gaacgcgagcattgcggttaccgattcagagcgaaatattgtggggaatgtggcgctgac
aacgacattgctgcgcgcatctgccacgaatgtgacgccacattagtcgatccggacaag
aagttgaaagaagcgcttaacctgaaagacgcgttgatattcgagtgcactgagatggac
ttgtctgtcttcaaacccaatgacggtaagtctcagttaaaagttacctactcgggagaa
ccataccaaggtgaagggaacgcgttagttcatgagttttggtctctcactaccaaaaag
caaaaacagaacttcaaagatcaatttgttcgtcctcacctcgcagacaagcatcgcccg
tttgaagaaacgtccccgactcgagtcgtggcaaatcagcaccgatttcgcttaccgcag
tttgtgattgccagaaagtcagggcgtttttggaaactgcgtgacaaaatttttgatggt
gaactgaagtag
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