Vollenhovia emeryi: 105563195
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Entry
105563195 CDS
T06016
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
vem
Vollenhovia emeryi
Pathway
vem03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vem00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105563195
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vem03041
]
105563195
Enzymes [BR:
vem01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
105563195
Spliceosome [BR:
vem03041
]
Complex A
U2 snRNP components
U2 related factors
105563195
Complex B
105563195
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CdAMP_rec
Motif
Other DBs
NCBI-GeneID:
105563195
NCBI-ProteinID:
XP_011869965
LinkDB
All DBs
Position
Unknown
AA seq
1030 aa
AA seq
DB search
MVRNSDKDRHHRRRSRSRSRSRSGEPEKKRRRSRSRERERERDKGRHRERRSRSRDRDRE
RGDRRERSERDRDRERKRGDSKEKRLTGSKSSRSGKERSNRSRSRDRKDKEKGDNEELPF
DHTKLDKEEEQKRLELEMQKRRERIERWRAERKKKELEATKKDGKTSILANLQLPMKKWS
LEDDSDEETPVVQNNKEAKEEGVREEIEEVMEEVKDEEEEIDPLDAFMAEVQEEVRKVNK
FDNKAPKSANNGTNSASQSGGVVIMTGVAKKKVQKQKGELIEQNQDGLEYSSEEEGENLH
ETAAGIANKQKRELAKVDHATTDYQPFRKSFYVEVPEIARMTSEEVEAYKEELEGIRVKG
KGCPKPIKSWAQCGVTKKELEVLKKLGYEKPTPIQCQAIPAIMSGRDLIGIAKTGSGKTL
AFLLPMFRHILDQPPLADGDGPIALIMTPTRELCMQIGRDSKKFTKSLGLSHVCVYGGTG
ISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVM
RIMENVRPDRQTVLFSATFPRQMEALARRILTRPVEVQVGGRSVVCKDVEQHVVVLEEDQ
KFYKLLEILGHYQDKGSTIIFVDKQENADTLLKDLMKASYSCMSLHGGIDQCDRDSTILD
FKAGRTKLLVATSVAARGLDVKHLVLVINYDCPNHYEDYVHRCGRTGRAGNKGYAYTFIT
SEQERYAGDILRAYELAGVPVPEPLRQLWEGYKARQAADGKKVHTGGGFSGKGFKFDESE
AALANEKKKFQKAALGLQDSDDEDIENDIDQQIESMLAPKRTVREIAKPTATSITVPGQP
IPSATDKLELARRLASRINIAKNLGAEAKGATQQAAEAILKGAGPTNLITAKTVAEQLAA
KLNTKLNYQPREEDLVESDVETGEQTFRKYEEELEINDFPQQARWRVTSKEALAQISEYS
EAGLTVRGTYIAPGKTPPEGERKLYLAIESTSELAVSKAKAEVSRLIKEELIKLQASGAH
TASRGRYKVL
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
atggtgcggaatagcgacaaggacagacaccaccggcggaggtcgaggtcgaggtcgaga
tcgagatcgggcgagcccgagaagaagcgacggcggtccaggagcagggagcgcgagagg
gagagagacaaggggcgacatcgcgagcgacggagtcgttcgcgggacagagacagggag
cggggcgacagaagggagcgctccgagagggacagggatcgcgagagaaaacgtggagac
agtaaagaaaagcgtcttacaggctcgaaatcctcgcgctccggcaaagaacggtcgaac
aggtctcgctcgcgcgacagaaaggataaagagaagggggacaatgaggaattgccgttc
gatcacaccaagttggacaaggaggaagagcagaaaaggctggagttggaaatgcaaaag
agaagggagaggatagagagatggcgtgcggaaaggaagaagaaagagctggaagcgacc
aagaaagacggtaagacatctattttggcaaatcttcagctacccatgaaaaagtggtcc
cttgaggatgatagtgacgaagagactcctgtggtacagaataacaaggaggcaaaagaa
gaaggtgtaagggaagaaattgaggaagtgatggaagaggtgaaagatgaagaggaggag
attgatccgcttgatgcttttatggccgaggtgcaggaagaagtgaggaaagtgaataaa
tttgataacaaggctccaaaaagtgccaacaatggcacgaattctgcatcgcagagtggc
ggcgtggtcattatgaccggagtggcaaagaaaaaggtgcagaaacaaaagggggaattg
attgagcaaaatcaagacggactggagtattccagcgaggaggagggcgagaatcttcac
gagaccgcggctggcattgcgaacaaacagaagcgggaattagccaaggttgatcatgcc
actacagattatcagccgttccgaaagtccttctacgtcgaagtgcctgagattgcgaga
atgacgtcagaagaagtagaggcatacaaggaggaattagaaggcattcgcgtgaaaggt
aaaggttgcccgaagcccatcaagtcctgggcgcagtgcggcgtgaccaagaaggaattg
gaagtattaaagaaactcggttacgagaaaccgacgcccattcaatgccaggcgatcccg
gcgatcatgtctggccgcgatctcataggcatcgcgaaaaccggtagcggaaaaacgctt
gcctttctcttaccgatgtttcgtcacatactcgaccaaccaccgttggcagacggtgac
ggaccgattgcgttgatcatgaccccaactagggaactgtgcatgcaaatcggtagggat
tcgaaaaaattcaccaagtcactgggcttgtcgcacgtgtgcgtttacggcggtaccggt
atttccgagcaaatagcagaacttaagagaggggcggagatcattgtgtgcacaccggga
aggatgatcgacatgctcgcggctaatagcgggcgagtaacgaacttacgccgggtgacg
tacgtggtgcttgacgaagccgacaggatgttcgacatgggcttcgagccgcaggtgatg
cgtattatggagaatgtcaggccggatagacagacggtgctgtttagcgcaacgtttccg
cgacaaatggaggcgctagccaggagaatactcacgagaccggtcgaggtccaggtcggc
ggacgttccgtcgtttgcaaggatgtggagcaacatgttgttgtactcgaggaagatcag
aagttctacaagttgcttgaaatccttggacattatcaagacaaaggctccaccattata
ttcgtagacaagcaagagaacgcggacacgttgcttaaggatcttatgaaggcttcgtat
tcctgcatgtcccttcacggcggtatagaccaatgcgaccgagattcaactatattggac
ttcaaggcgggacgaacaaagttgctcgtggccacgtccgtcgccgctaggggcttggac
gtaaagcacttggtgttagtcatcaattacgattgtcccaaccactacgaagattacgtg
cacagatgtggtagaactggtcgagccggaaataaaggatacgcgtacacctttattaca
tcggaacaagaacgttacgccggcgatattttacgtgcgtacgagttagcgggcgtaccc
gttccagagcctttgcgccaattatgggaaggttacaaagcccgtcaagccgcggacgga
aagaaggttcataccggaggtggtttcagtggcaaaggatttaagttcgacgaatcggag
gctgccttggcgaacgagaaaaagaaattccagaaagcagccttgggactgcaggattct
gacgatgaggacatagaaaacgatatcgatcaacagatcgagagtatgctggcacctaag
cgaaccgttcgtgaaatagccaaaccgaccgcgaccagtattacggtgcccggtcaaccg
atacctagtgctactgataagctcgaattggccagacgattggcgtcgagaataaacatt
gcaaagaatctgggcgccgaggcgaaaggcgcaactcaacaagcagcggaagctatactc
aagggtgcaggaccaacaaatctgattacggcaaagacagtcgcggaacaattggccgcg
aagctgaacaccaaattgaattatcagccgcgcgaggaagatctcgtggagagcgacgta
gagacgggcgagcaaacattccgcaagtacgaagaggaactcgagatcaacgacttcccg
caacaagcgagatggcgcgtcacgagcaaggaggctcttgcccagatctcggaatattcc
gaggcgggtctgacagtgagaggaacgtatatcgcgcctgggaaaacgccaccggaaggc
gaaaggaagttatacctggcaatagagtcgacgagcgagttggcagtcagcaaggccaag
gcggaagtgtctcgactcatcaaggaggaactcatcaaactgcaggcgtctggcgctcac
accgcgtcgcgaggtcgatacaaagttttataa
DBGET
integrated database retrieval system
