Vollenhovia emeryi: 105565637
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Entry
105565637 CDS
T06016
Name
(RefSeq) THO complex subunit 1 isoform X1
KO
K12878
THO complex subunit 1
Organism
vem
Vollenhovia emeryi
Pathway
vem03013
Nucleocytoplasmic transport
vem03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vem00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105565637
09122 Translation
03013 Nucleocytoplasmic transport
105565637
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vem03019
]
105565637
03041 Spliceosome [BR:
vem03041
]
105565637
Messenger RNA biogenesis [BR:
vem03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
105565637
Spliceosome [BR:
vem03041
]
Complex C
Other components
EJC/TREX
105565637
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
105565637
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
efThoc1
Death
DUF5535
Carbpep_Y_N
Motif
Other DBs
NCBI-GeneID:
105565637
NCBI-ProteinID:
XP_011874389
LinkDB
All DBs
Position
Unknown
AA seq
650 aa
AA seq
DB search
MAVFEVLRKDYSDYLQQHFKLSDVSLFQKKCVERCANDGDRKPAIDQALRDTLLVVLTEN
SSGNVRSLESYITFCIELCRKDLATASMPVMLLGDIFDSMTLDRCEQLFTFVENNVTVWK
EDLFFTACKNNLLRMCNDLLRRLSRSQQTVFCGRILLFLAKFFPFSERSGLNIVSEFNLE
NHTEFGLEEDNLEQITKEDDKSESKIPIDYNLYRKFWALQDFFRNPNQCYNKMHWKVFST
HASNVLSAFASFKLEEQRSYPSTCIKMDTSTEGPHKETHYFAKYLTNQKLLELQLSDSNF
RRYVLLQFLILFQYLNSTVKFKAETHELKPDQVEWVKATTEQVYTLLAETPPDGPTFAET
VKNILKREEHWNAWKNEGCPPFKRPTSDAADDEPRKLRRPRRRIGDAIRDAQAVGKYHMG
NPELSKLWNLCPNNLEACKSKDRDFLPSLETYFEDAILELDPSALVDDKYKKVNDGNFGW
RALRLLARRSPHFFVHGNYPINKLPEYLETMIKKIAKDRPQTQSDAKLDTEETPPSECTD
QEFNEDVLKQESEQVEAESSDVKARKLNKVTSEMVAKLSESLKNDWKKLATKFGYTNDEI
AFFQSKATPYEQCKTMLEIWAEEDEDASVENLAYMLEGLKYTEALMVLKS
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgtttgaagtgctgagaaaagactacagcgattacctgcagcagcatttcaag
ctgtcggacgtttcgttgtttcaaaagaagtgcgtcgaacgttgtgcgaatgatggcgac
aggaagccggcgatcgaccaggcgctccgagacaccctgctggtcgtgctgacggaaaac
tcctcgggtaacgtgcgctccctcgagtcgtacatcacgttctgcatagagctgtgcagg
aaggacctcgcgacggcgagtatgccggtgatgttgttgggcgacatcttcgactcgatg
acactggacaggtgcgagcagctgttcaccttcgtggaaaacaacgttaccgtgtggaag
gaagatctcttcttcacggcctgcaagaataacttgttgagaatgtgcaacgacctgctg
aggaggttgtctcgttcgcagcaaacggtattctgtggtaggattctgttgttcctcgca
aagttcttccccttctccgagaggtccggcttgaatatcgtcagcgagttcaatctggag
aatcacacggagttcggtttggaggaggacaacttggagcagatcaccaaggaagacgac
aagtcggagagcaagatacccattgattacaatttgtatagaaagttctgggctctgcaa
gacttcttcagaaatccgaatcagtgctacaataaaatgcactggaaggtcttttcaact
catgcatctaatgtgctgtcagcgtttgcttcttttaaattggaggagcaacgtagttac
ccttcgacatgtatcaagatggatacttctacggaaggcccccataaggagacgcactat
tttgccaaatatttgacaaatcagaagttgttggagttacagctgtcagattccaatttc
agacgatacgtattgctgcaatttctcattcttttccagtatctgaatagcactgtaaaa
ttcaaggctgagacacacgaactcaagccggaccaagtggaatgggtaaaggccactacc
gagcaggtttatactctactggccgaaacaccgcccgacggtcccacgtttgctgagacc
gtgaagaacattttgaagcgcgaggagcactggaatgcgtggaagaatgagggttgtcca
ccgtttaaacgaccgacgtcggacgccgctgacgatgagccacgaaagctgaggagaccg
aggcggcgtatcggtgatgcgattagagatgcgcaggcggttggaaaatatcacatggga
aacccagaactctccaaactgtggaatctatgtccaaacaatctcgaggcatgcaaatct
aaggatagagatttccttccatccttagaaacgtacttcgaagacgctatattggaattg
gaccctagtgcgttggtagatgacaagtacaaaaaggtgaacgatggtaactttggttgg
agagcattaagactattagcgagacgaagcccgcatttctttgttcatggcaattatcct
ataaataaattgccagagtaccttgagacaatgattaagaaaattgccaaagaccgtcca
cagacacagtctgatgcaaaattggacaccgaggaaacgccgccgtcggaatgtaccgat
caagaattcaacgaagacgtcttgaagcaggaaagcgagcaggttgaggccgaaagctct
gatgtgaaagcaagaaagttaaataaagtcacctcggaaatggtggcgaaattatcggag
agtctgaaaaacgattggaagaaattagcgacgaaatttggttacacaaatgatgagatt
gcttttttccaaagtaaagcgacgccgtatgaacaatgcaagactatgctcgagatatgg
gcggaagaagatgaagatgcatcagtggaaaatttagcttatatgttggaaggtttaaaa
tacacagaagcgttaatggtactaaaatcttaa
DBGET
integrated database retrieval system
