Vollenhovia emeryi: 105565872
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Entry
105565872 CDS
T06016
Name
(RefSeq) probable ATP-dependent RNA helicase DDX55 homolog isoform X1
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
vem
Vollenhovia emeryi
Brite
KEGG Orthology (KO) [BR:
vem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vem03009
]
105565872
Enzymes [BR:
vem01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
105565872
Ribosome biogenesis [BR:
vem03009
]
Eukaryotic type
Pre-60S particles
Helicases
105565872
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
Helicase_C_2
Motif
Other DBs
NCBI-GeneID:
105565872
NCBI-ProteinID:
XP_011874808
LinkDB
All DBs
Position
Unknown
AA seq
691 aa
AA seq
DB search
MPYCTAHARKAGRSNNTAPQKRPPRILHNTRASRVWSGVWSIRDTRYFVNRRNYIPNSRR
ITSKGTMKTRRWEQLDVRLSDPVLRTLKQLRFFHTTPVQAACIPLLLNGKDVAAEAVTGS
GKTLAFLIPLLEILQRRAEKWKTTEVGAIVVSPTRELATQISEILAEFLDNIPSLRQVLL
VGGVSLKRDAEKLKEGTNIIVATPGRLQDILSNCNSVNLNLKSLEFLVLDEADRLLDLGF
SAALDSILSYLPRLRRTGLFSATQTKQLEHLIRAGLRNPALIVVKEKSNVSTPVNLKNSF
AIVQPEYKLPVMIDFIRSIGFQTKYMIFLPTCACVDYFSRVIQTLLPSINVLALHGKMKS
KRYKVFDKFRRAENGILICTDVMARGIDISEIDWVLQYDPPSMASSFVHRCGRTARIGNE
GDALLFLLETESAYVDFIRRNQKVELREMETKLNEDTVDECLRCMRLMQQKDRLVFDKAN
RAFVSYVQAYSKHECNLILQLKDIDLGKLAMGFGLLRMPRMPELKGKNVSSFVGPEIDVN
AIPYLHEQRELRRIQRLSEYQNTGVWTNNHRCKQRRTESWSETKKRKLERREKRGKRKER
KELKQQVSTTRNKKKRKRINEEDVEQLAKDIALIKKFKKKKELRISEMIRMLDSTRSSNV
QINARLASVCSARSYLCWVFKRVPHCATGPG
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgccatattgcactgcgcatgcccgaaaagcaggcagatctaacaacactgctccccag
aagagacctccgcgaatcctccataatacacgtgcgtcacgtgtgtggagtggtgtgtgg
agcattcgtgacactcgttattttgtaaatagacgaaattatattcccaattcgcgccga
ataacaagcaaggggacaatgaagacacggagatgggaacagctggatgtacgattgagc
gatcccgtactgaggacgctcaagcagttgcggtttttccacacgacgccagttcaggca
gcttgtataccgttgttattgaacggcaaggacgttgcggcggaagcggtcacaggcagc
ggcaagacactcgcttttcttattcctctattggagatattacaaaggcgagctgagaaa
tggaagaccacggaagtaggcgcgatagtggtcagccctacgagagagctggctacgcag
attagtgaaattttagccgagttcttggacaacattccgtcgctgaggcaagttctactg
gtgggcggtgtgtcgctcaagagagatgcagagaaactgaaggaagggacgaatattatt
gtcgccacacccggtagattgcaagatatcttgtccaactgtaattccgtcaacttgaat
ctaaagtctttggaatttctcgtgctggacgaggcagatagattactggacttgggattc
tcggcggccttggatagtattttaagctatctgccgcgtctcaggagaacggggctgttt
tcggcgacgcagacgaagcaactggagcacttgatcagggcgggactgagaaatccagcg
ttgatcgttgtgaaggaaaagtccaatgtctccacgcctgtaaatttgaaaaatagtttt
gcaattgtccagcctgagtacaagttgccggtgatgatagattttatacgctcgatagga
tttcaaacgaagtatatgatattcttacctacctgcgcgtgcgtggattacttcagccga
gttatacagacattattgccctcgatcaacgtgctcgctctacacggtaaaatgaaaagc
aagaggtataaagtgttcgataaatttcgacgtgccgaaaatggcattttaatatgcaca
gacgtaatggctcgtggcatcgatatatcggaaatagactgggtgttacaatacgaccct
ccgtcaatggctagcagttttgtacacaggtgcggtagaaccgctaggattggtaacgaa
ggagacgcattgctgtttcttctggagaccgagagcgcgtatgttgatttcattagaaga
aatcaaaaggtcgaactgcgtgaaatggaaacaaaattgaacgaggatactgttgacgaa
tgcttgcggtgtatgaggctgatgcaacaaaaggatcgacttgtgttcgacaaagccaac
cgggccttcgtctcatacgtacaagcgtacagtaaacacgagtgcaatttgattcttcag
ttaaaagatatcgacttgggcaagctggctatgggctttggtcttttgagaatgccaagg
atgccagagctcaaggggaagaatgtgtcatctttcgtcggccccgagatcgatgtaaac
gcgataccttatctgcacgagcaacgtgaattgcgtaggattcaaagactgagcgaatat
cagaacactggtgtttggacgaataatcataggtgcaaacaaaggcgaactgaatcctgg
tccgagaccaaaaagaggaaactcgagaggcgagagaaacgaggtaaacggaaggagagg
aaggaattgaaacaacaggtttcaacgactcgtaacaaaaagaagaggaagcgaataaat
gaggaagatgtcgagcagttggcgaaagatatagcattaattaagaaatttaagaagaag
aaggagttaaggatctcggagatgattcgcatgttagattcgacacgaagctcgaacgtg
caaataaacgcaagactcgcttccgtatgttctgctcgctcctacctttgttgggtcttt
aaacgcgttccccactgcgcgacggggccaggataa
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