Vollenhovia emeryi: 105570427 Help Entry 105570427         CDS       T06016                                  Name (RefSeq) DNA ligase 1 isoform X1   KO K10747   DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] Organism vem  Vollenhovia emeryi Pathway vem03030   DNA replication vem03410   Base excision repair vem03420   Nucleotide excision repair vem03430   Mismatch repair Brite KEGG Orthology (KO) [BR:vem00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     105570427    03410 Base excision repair     105570427    03420 Nucleotide excision repair     105570427    03430 Mismatch repair     105570427  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:vem03032]     105570427    03400 DNA repair and recombination proteins [BR:vem03400]     105570427 Enzymes [BR:vem01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      105570427     6.5.1.6  DNA ligase (ATP or NAD+)      105570427     6.5.1.7  DNA ligase (ATP, ADP or GTP)      105570427 DNA replication proteins [BR:vem03032]  Eukaryotic type   DNA Replication Elongation Factors    Other elongation factors     105570427  Prokaryotic type    Elongation factors (archaeal)     Other elongation factors      105570427 DNA repair and recombination proteins [BR:vem03400]  Eukaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     Long Patch-BER factors      105570427    NER (nucleotide excision repair)     Other NER factors      105570427    MMR (mismatch excision repair)     Other MMR factors      105570427 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  DNA_ligase_A_M DNA_ligase_A_N Tetraspanin DNA_ligase_A_C mRNA_cap_enzyme Peptidase_S68 Motif Other DBs NCBI-GeneID:  105570427 NCBI-ProteinID:  XP_011882993 LinkDB All DBs Position Unknown AA seq 1119 aa AA seqDB search MLKIFTTCSRLSSLALPARRLELAVAARSQFVFNRIHATNSRNSDEQKNQDATENGKRKR DNSSSRWSCSSPPSKKQNTKLTKPKLIAKTPSPSVKPRAKLGATPKNKLNKLSPGSSKKT EKKQLKDTPDRKKKKKETDETLNGAIEEETNNTQIENGTAKGKKKKEEAASSKKKSESNK VKETVKKKRARIIEPVDSSDDENHLPLPESPKRSEVKDEEKITESVNESSEINETASNKD VIESASDNEEKSPKESTPEKKSQSTVKNESPEKKPTPEKKAKKVSSFFMPTKQKGDAKDD KVSNGKSASRSYNPIASVYHPIDDACWKRGDKTPYSAFARTLEIIEETSARLKIIEVLSN YFRSVIVLSPADLLPSVYLCLNQLAPAYEGIELGVADTNLMKAIAQCTGRTLAQIKDDVQ KVGDLGIVAESSRSNQRTMFQPAPLTVPNVYAKLKEIGQMTGQASLTKKLDKIQTLFVAC RNTEARYLIRSLAGKLRIGLAEQSVLQALALACAMTPPEQNYPPEILNASKKMSSDRFKE KYEEIALILKTTYCECPNYNLIIPVLLEDGINALPSKCKLTPGIPLKPMLAHPTKGVQEV LTRFEGLKFTCEWKYDGERAQIHVADDGQINIYSRNQENNTSKYPDIIKRFKNTRGELVK NCILDCEAVAWDREKKQILPFQILSTRKRKDANEEDIKVQVCVFMFDLLYLNDEPLVKKT FVKRRELLKQHFKEAEGEWKFATSMDTTTMEEVEVFLDESVKGNCEGLMVKTLEKEATYE IAKRSRNWLKLKKDYLDGVGDTLDVIVIGGYIGKGKRTGTYGGFLLACYDQENEEYQSIC KIGTGFKEEDLENHTKFFKDQVIPQAKTYYRFDSSHEPDHWFEPIQVWEIKCADLSLSPV HRAAIGIILGCAMFGLSIWMRFEPMLEEWVEFMNMYEFYIGVYVLIATSVLVMAIAFIGC AAALMEHIMTLYAHVGLQALSFICCLAGAAVILDYSTYDSKIQPIIERSMYSLIVNSHHD AASSILRIIQETVGCCGADGPRDYTQLRKPLPTECRDTVTGNAFHHGCVEELSWFLEARS GWLAGMAMALCMLHVIIAVLSLTLVRAIKKEEESITFKR NT seq 3360 nt NT seq  +upstreamnt  +downstreamnt atgctaaaaatcttcaccacatgctcgcgcttgagctcgttggctctaccggcgcgacgg ctagagctcgcggtcgcagctcgcagccaattcgtttttaatcggatacatgcaaccaac agccgcaactcggacgagcagaagaatcaggatgcaacggagaacggcaaacggaagagg gacaactctagcagtcgttggtcttgcagttctccaccttcgaagaagcagaacaccaaa cttacgaagccaaaactgattgccaagactccctcgccaagtgtgaaacctcgtgcgaaa ctaggagctacaccgaagaataagttgaataaactctcacctgggtcgtcgaagaagaca gagaagaaacaattgaaagatacacctgataggaagaagaagaagaaggaaacggacgaa actctaaatggcgccatagaagaggagaccaataatactcaaatagaaaatggtacggct aagggtaaaaagaaaaaggaagaagctgcttcttcgaagaagaaatctgagtctaataag gtgaaggaaactgtgaagaagaagcgtgccaggatcattgagccagtagattccagtgac gacgagaatcacctacctttgcctgaaagtccgaaaagatcggaggttaaggacgaggaa aagataacagagagcgtaaacgagtccagcgaaataaatgaaaccgcttcaaataaagac gtgattgaaagtgcgtcggacaacgaagagaaaagtccgaaggagtctacacctgaaaag aaatcacagtctaccgttaagaatgaaagcccggagaagaagcctacgcctgagaagaaa gctaaaaaagtgtccagcttttttatgcctacaaaacaaaagggcgacgcgaaggatgac aaagtgagcaatggaaaaagcgccagccggtcctacaatcccatcgcgtctgtctatcat ccgatagacgatgcatgctggaaacgaggggacaaaactccatatagcgcttttgcgcgc accttggagatcatcgaggagacaagcgcaagattaaagataatcgaggtattgtcaaat tacttccgatccgtcatagtcctgagtcccgcggatcttctgccgagcgtttatctgtgc cttaatcaattagcgccggcgtacgaaggaattgagcttggagtcgcggacacgaatcta atgaaggcgatagcgcagtgtaccggtagaacactggcgcaaattaaagatgatgtccag aaggtcggcgatttgggcatcgtggcggaaagtagcagatccaatcaaagaactatgttt caaccggcaccgttgacggttcccaacgtgtacgccaaactaaaggagatcggccagatg acagggcaggcgtctctgacgaaaaagttagataagattcaaacgctgttcgtggcgtgc cgtaatacagaagcgagatacctcattagatcattggctgggaagcttcgtattggatta gcggaacaatctgttttacaagcattggctttagcttgcgcgatgacaccgccggaacaa aattatccacctgaaattctgaatgcaagcaaaaagatgtcgagtgatcggtttaaagaa aagtatgaagagatagcgcttatattgaaaacaacgtattgtgaatgtccgaattacaat cttataattcccgttctactggaagacggaattaatgccttgccaagcaagtgcaagctc actcctggaatacctttgaaacccatgttggcacatcctactaagggtgttcaagaagtc ctgacacgtttcgaaggcttgaaatttacttgcgaatggaagtacgatggggaaagagca cagatacacgtcgcggacgacggtcagattaatatatacagtagaaatcaggagaacaat actagcaagtatccagatatcattaagcgattcaagaatacacgtggcgagctggtgaag aattgcatactggattgcgaggcagttgcttgggatagagagaagaagcaaatcttaccg ttccaaatactcagcacaagaaagcgaaaggatgctaatgaggaagatatcaaagtacaa gtgtgcgtgttcatgttcgatttgttatatttaaatgatgagccgttggtgaagaaaaca ttcgtgaaacgtcgtgaattgctgaagcagcacttcaaggaagcggagggtgaatggaaa ttcgccactagtatggataccacgacgatggaagaggtggaagtcttcttggatgaatct gtgaagggaaattgcgagggcctgatggtgaagacgttggagaaggaggcgacctacgag atcgcgaagcgatcgagaaactggctgaaactgaagaaggattatctggacggcgtcggc gatacactcgacgtgatcgtgatcggtggttacatcggcaaagggaagaggaccggcact tacggtggtttcctcttggcttgttacgatcaggaaaacgaggagtaccaaagcatctgt aagattggtacaggattcaaggaggaggacctcgagaatcacaccaaattcttcaaagat caagtaataccgcaggcgaaaacgtattaccgctttgatagcagccacgagccggatcat tggttcgagcccattcaagtctgggagatcaaatgtgccgatctctccctatcgcccgtg cacagagctgctatcggaataatcctgggctgtgcgatgttcggactgtccatctggatg cggttcgagccgatgctcgaagaatgggtggagttcatgaacatgtacgagttctacatt ggggtttacgtgctgatcgctacctcggtgctcgtcatggccatcgccttcatcggctgt gctgccgcgcttatggaacacatcatgaccttatacgcccacgtgggtcttcaagcgctc agtttcatctgctgtctagccggagcggcggtcattcttgattattcgacgtacgacagt aagattcagcccatcatcgaacggtctatgtacagtctcatcgtcaactcccatcacgac gcggcgagctccattctacgaataatccaggaaactgtcggatgctgcggagccgatgga ccgagggattacacacaattgcgtaaaccactgcccaccgagtgccgggacaccgtaacc ggaaacgccttccatcacggctgtgtggaggaactatcctggtttctggaggcgagatcg ggatggctcgccggtatggcgatggcgttgtgcatgcttcacgtgatcatagcggtgctg tcgctgacgcttgtacgagctatcaagaaagaagaggaatccataactttcaagcgttag

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