Verrucosispora sp. NA02020: HUT12_02940 Help Entry HUT12_02940       CDS       T06958                                  Name (GenBank) DNA ligase   KO K01971   bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] Organism ver  Verrucosispora sp. NA02020 Pathway ver03450   Non-homologous end-joining Brite KEGG Orthology (KO) [BR:ver00001]  09120 Genetic Information Processing   09124 Replication and repair    03450 Non-homologous end-joining     HUT12_02940  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:ver03400]     HUT12_02940 Enzymes [BR:ver01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      HUT12_02940 DNA repair and recombination proteins [BR:ver03400]  Prokaryotic type   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     Two-component NHEJ DNA repair complex      HUT12_02940 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_A_M DNA_ligase_A_C DNA_ligase_OB_2 DUF5415 Motif Other DBs NCBI-ProteinID:  QKW11842 UniProt:  A0A7H8K742 LinkDB All DBs Position 626843..627784 Genome browser AA seq 313 aa AA seqDB search MPGAPLKPMLAVTGQLPAGAGWAYEFKWDGVRALADIAAGRQRLYARSGVEITTAYPELI PLGEQVDDALLDGEVVLFDRAGRPSFTALAERMHVRDPVKAARLAASVPVTYMIFDLLRL RGTDLTGWPYARRREALDELGLGAARWTVPPVFPDGPATYDAAGEHGLEGVMAKRADSAY RPGVRSPDWVKVKLEVTGDFVIGGWRPGARRIGGLLVGVPGAGGRLIYRGRVGGGIGAAL ERELLRELEPLRTTASPFGGDVPREDARGAIWVTPQMVVEVKYGQRTPDGRLRFPRVLRL RPDKAAEEVADAE NT seq 942 nt NT seq  +upstreamnt  +downstreamnt gtgcccggcgcgccactgaagccgatgctcgcggtgaccgggcaactgcctgccggcgcc gggtgggcgtacgagttcaagtgggacggcgtacgcgcactggccgacatcgccgccgga cggcagcgcctgtacgcgcgctccggggtggagatcaccaccgcctacccggagctgatc ccgctcggcgaacaggtcgacgacgcactgctcgacggtgaggtggtcctcttcgaccgg gccggtcgaccgtcgttcaccgccctggccgagcggatgcacgtacgggatccggtcaag gcggcccgactggcggcgagcgtccccgtcacgtacatgatcttcgacctgctacggctg cgcggcacggacctcaccggctggccgtacgcccggcgtcgggaagccctcgacgaactc ggactgggcgcggcgcggtggacggtcccaccggttttcccggacggcccggccacctac gacgctgccggtgagcacggcctggaaggggtgatggccaagcgggcggactccgcctac cggcccggcgtgcggtcgccggactgggtgaaggtgaagctggaggtgaccggcgacttc gtgatcggcggctggcgacccggtgcccgccggatcggcggcctgctggtcggggtgccc ggggccggtgggcggctgatctatcgggggcgggtcggcggcgggatcggggcggccctg gaacgcgaactgttgcgggagttggagccgctgcgcaccaccgcctccccgttcggcggc gacgtgccccgggaggatgcgcggggcgcgatctgggtaaccccccagatggtggtggag gtcaagtacggccagcgcacgccggacgggcgactgcggttcccccgggtcctgcggctg cggccggacaaggcggccgaggaggtggcggatgccgagtga

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