Vibrio europaeus: IXK98_19685
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Entry
IXK98_19685 CDS
T07114
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
veu
Vibrio europaeus
Pathway
veu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
veu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
IXK98_19685 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
veu03400
]
IXK98_19685 (uvrB)
DNA repair and recombination proteins [BR:
veu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
IXK98_19685 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
IXK98_19685 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_30
UvrD-helicase
UB2H
AAA_22
FlaC_arch
Motif
Other DBs
NCBI-ProteinID:
QPG35682
LinkDB
All DBs
Position
1:complement(2421613..2423643)
Genome browser
AA seq
676 aa
AA seq
DB search
MSKVFDLVSDYKPSGDQPTAIEQLLDGLDSGLAHQTLLGVTGSGKTFTLANVIASAQRPA
ILLAPNKTLAAQLYGEMKSFFPNNAVEYFVSYYDYYQPEAYVPTTDTFIEKDASVNAHIE
QMRLSATKALLERKDAIIVASVSAIYGLGDPESYLQMMLHIRRGDVMDQRDILRRLAELQ
YSRNDVAFERGQFRVRGEVIDIFPAESDQDAVRIEMFDDEIDCISVFDPLTGAVKQRDLA
CYTIYPKTHYVTPRERILDAIEKIKVELEGRKKHLLDNNKLLEEQRISQRTQFDIEMMNE
LGFCSGIENYSRYLSGRSEGEPPPTLFDYLPHDGLLIIDESHVTVPQIGAMYKGDRSRKE
TLVEFGFRLPSALDNRPMKFEEFESISPQTIFVSATPGNYELEKSDGEIADQVVRPTGLL
DPQLEVRPVATQVDDLLSEIRICAAKDERVLVTTLTKRMAEDLTEYLTEHDVKVRYLHSD
IDTVERVEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTI
GRAARNVAGKAILYADRITKSMEKAMGETDRRREKQQDYNEKMGIEPQALKRNVKDIMEL
GDITKSKKQRVSKTVPLSKVAEPSQSYDVMTPQQLDKEISKLEAQMYQHAQDLEFELAAQ
KRDEIDKLRKQFIVNS
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaagtttttgatttagtgtctgattataagccctctggcgatcagcccaccgcg
attgagcaactacttgatggtcttgattcaggtttagcccaccaaactttacttggcgta
actggttcaggaaaaacttttacacttgccaacgtaattgcgagcgctcagcgtccagct
attctacttgctccgaataaaacgctagcggctcagctttatggtgagatgaaatctttc
ttccctaataatgccgttgaatactttgtttcttactacgattactaccagcctgaagcc
tatgtgcccacgaccgatacctttatcgagaaagatgcttccgttaacgcgcatattgag
cagatgcgtctctctgcgaccaaagccctattagaacgtaaagatgccattattgtcgct
tctgtatcggcgatttatggtttgggggatcctgaatcttatctgcaaatgatgctacat
atccgccgtggtgatgtgatggatcagcgcgatattctgcgtcgcctagctgaactgcaa
tatagccgcaatgacgtcgcatttgagcgtggtcagttccgcgtgcgtggcgaagtgatt
gatatctttccagctgaatccgatcaagatgcggtgcgtatcgagatgttcgatgatgag
attgattgtattagcgtgtttgatccgctgacaggagcagtcaaacagcgagacttggca
tgttacactatttatcccaaaacccactatgtcacgccaagagagcgaattcttgatgcg
atagagaaaattaaagtggagcttgaagggcgcaagaaacacttacttgataacaacaaa
ctgcttgaagagcagcgtatctcgcagcgtactcagtttgatattgagatgatgaacgag
ctgggcttttgttcaggtatcgaaaactactcgcgctatctaagtggtcgtagcgagggc
gagccgccaccaaccttgtttgattacttgcctcacgatggtttgttgatcattgatgaa
tcccacgttaccgtacctcagattggtgccatgtacaaaggtgaccgctctcgtaaagaa
acgctggtggagtttggtttccgcctaccttcggcactcgacaatcgaccgatgaagttc
gaagagtttgaatccatttcgcctcagacgatatttgtctctgcaacgccaggtaattat
gagctagagaaatccgatggtgaaattgcggatcaggttgttcgtcctacaggcttgctc
gatcctcaacttgaagtgcgtccggttgcaacacaggtggatgatctgctgtcagaaatt
cgtatttgcgccgctaaagatgagcgagttctggtgacgactctaaccaagagaatggcg
gaagatttaacagaatacctgactgagcacgatgttaaggttcgctatctacactcagat
attgatacggtggaaagggtcgaaatcattcgcgacttgcgtcttggagagtttgatgtg
ttggtgggaatcaacttacttcgtgaaggcttagatatgccagaagtatccttagtggcg
attttggatgctgataaagaaggtttcttgcgttcagagcgttcgcttatccagacgatt
ggccgtgcagcacgtaatgtggcgggtaaagcgattctgtatgcagaccgcattactaag
tccatggaaaaggcgatgggtgaaactgatcgtcgtcgcgaaaaacagcaagattacaac
gagaagatgggcattgagccccaagcactaaaacgtaatgttaaagacattatggaacta
ggtgacattaccaagagtaagaagcagcgcgttagtaagactgttccattgtctaaagtg
gctgagccttcgcagagctatgatgtgatgacgcctcagcaacttgataaagagattagc
aaactagaagcgcagatgtatcaacatgcccaagacttagagtttgaacttgcagcgcag
aagagagatgagatagataagcttcgcaagcagtttattgttaatagctaa
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