Aliivibrio fischeri ES114: VF_0111
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Entry
VF_0111 CDS
T00236
Symbol
rph
Name
(GenBank) ribonuclease PH
KO
K00989
ribonuclease PH [EC:
2.7.7.56
]
Organism
vfi
Aliivibrio fischeri ES114
Brite
KEGG Orthology (KO) [BR:
vfi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vfi03016
]
VF_0111 (rph)
Enzymes [BR:
vfi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.56 tRNA nucleotidyltransferase
VF_0111 (rph)
Transfer RNA biogenesis [BR:
vfi03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
VF_0111 (rph)
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Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
FHBP_N
Motif
Other DBs
NCBI-ProteinID:
AAW84606
UniProt:
Q5E8P0
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All DBs
Position
I:129121..129837
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AA seq
238 aa
AA seq
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MRPSGRTAQQVRPITLTRNFTAHAEGSVLVEFGNTKVICTASVEENVPRWLKGKGKGWVT
AEYGMLPRATHTRNRREAASGKQGGRTMEIQRLIARSLRAAVDLEALGEQMITVDCDVIQ
ADGGTRTASITGASVALADAINHMIATGKLKSNPMKGHVAAVSVGIYNGEAICDLEYVED
SAADTDMNVVMMEDGKMIEVQGTAEEAPFSHQELLDMLALAQQGINDIIEKQKAALAE
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atgcgccctagcggaagaacagctcagcaagtccgtccaattacacttactcgtaacttt
actgcacacgcagaaggttcagtattagttgaatttggtaatacgaaagtaatttgtact
gcaagtgttgaagaaaatgttcctcgctggttaaaaggcaaagggaaaggttgggtaacc
gctgagtacggtatgttacctcgcgcaacacacactcgtaaccgtcgcgaagcagcaagc
ggtaaacaaggtggtcgtacgatggaaatccaacgtttgatcgctcgtagtttgcgtgca
gccgttgacctagaagcactaggtgaacaaatgatcactgttgactgtgacgttattcaa
gccgacggtggtactcgtacagcatctattactggtgcaagtgtggctttagctgacgca
attaatcacatgattgctacgggtaaactaaaatcgaacccaatgaaaggtcatgtagcg
gcggtttctgttggtatctacaatggcgaagcaatttgcgaccttgagtatgtagaagac
tcagcagcagatacagacatgaacgttgtcatgatggaagatggcaaaatgattgaagtg
cagggcacggcagaagaagcgccgttctctcaccaagaattgttagacatgctggctctg
gcgcaacagggcatcaatgacattattgagaagcagaaagcggcgttggccgaataa
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