Aliivibrio fischeri ES114: VF_0307
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Entry
VF_0307 CDS
T00236
Name
(GenBank) NifR3/Smm1 family protein
KO
K05539
tRNA-dihydrouridine synthase A [EC:1.-.-.-]
Organism
vfi
Aliivibrio fischeri ES114
Brite
KEGG Orthology (KO) [BR:
vfi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vfi03016
]
VF_0307
Transfer RNA biogenesis [BR:
vfi03016
]
Prokaryotic type
tRNA modification factors
Dihydorouridine synthases
VF_0307
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dus
DHO_dh
His_biosynth
PcrB
Motif
Other DBs
NCBI-ProteinID:
AAW84802
UniProt:
Q5E844
LinkDB
All DBs
Position
I:316316..317302
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AA seq
328 aa
AA seq
DB search
MSSYPLQRFSVAPMLDWTDRHCRYFHRQLSEHALLYTEMVTTGAIIHGKGDFLAYNEEEH
PVALQLGGSNVKDLVHCAKLAAERGYDEVNLNVGCPSDRVQNGRFGACLMAEPDLVAECV
AEMKAVVDIPVTVKTRIGIDDQDSYEFLTKFVSTVHEKGGCDQFTIHARKAWLSGLSPKE
NREIPPLDYPRAYQIKKDFPQLIIAVNGGIKTLSEAKEHLEHLDGVMIGREAYQSPYLLA
EVDQQLFGSDKPIKKRREIVESMYPYIERQLENGAYLGHITRHMLGLFQSMPGARQWRRY
ISENAHKPGAGIEVVKTALAKIPSELDV
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgagctcttatccactacaacgtttttctgttgcccctatgcttgattggacagatcgt
cactgtcgttacttccatcgtcaattatctgagcatgcgcttttatatactgagatggta
actacaggtgcgatcattcatggtaaaggtgattttcttgcgtataacgaagaagagcat
ccagtagctttgcagctaggcggttcaaacgttaaagatttagttcattgtgcgaaatta
gcagcagaacgtggttacgatgaagtaaacctaaatgtgggctgtccatcagatcgagta
caaaatggccgttttggtgcttgtttaatggcagaaccagacttagtagctgaatgtgtc
gctgaaatgaaagcggttgttgatattccagtaacggtaaaaacccgtattggtattgat
gaccaagacagctatgagtttttaactaagtttgtttcaacagttcatgaaaagggcggt
tgtgatcaatttactattcatgctcgtaaagcatggttaagtggtttaagcccgaaagaa
aaccgcgagatcccgccacttgattacccacgtgcgtatcaaattaagaaagatttccca
caattaattattgcggttaatggtggtattaaaacattatcggaagcaaaagagcattta
gagcatttagacggtgtgatgattggacgtgaggcttaccaaagtccgtatttattagcg
gaagttgatcaacaactttttggtagtgacaaaccaattaaaaagcgtcgtgagattgtt
gagtctatgtacccatatattgaacgtcagctagagaatggagcttacttaggccatatt
actcgtcatatgttaggtctattccaaagcatgccgggtgcgagacaatggcgtcgttat
atcagcgaaaatgcgcataagccaggagcaggcattgaagtggtaaaaacagcacttgct
aaaattccttctgaattagatgtatag
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