Aliivibrio fischeri ES114: VF_0821
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Entry
VF_0821 CDS
T00236
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase, flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
vfi
Aliivibrio fischeri ES114
Pathway
vfi00020
Citrate cycle (TCA cycle)
vfi00190
Oxidative phosphorylation
vfi00650
Butanoate metabolism
vfi01100
Metabolic pathways
vfi01110
Biosynthesis of secondary metabolites
vfi01120
Microbial metabolism in diverse environments
vfi01200
Carbon metabolism
Module
vfi_M00009
Citrate cycle (TCA cycle, Krebs cycle)
vfi_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
vfi_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
vfi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
VF_0821 (sdhA)
00650 Butanoate metabolism
VF_0821 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
VF_0821 (sdhA)
Enzymes [BR:
vfi01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
VF_0821 (sdhA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
DAO
Pyr_redox_2
GIDA
HI0933_like
Thi4
BEX
FAD_binding_3
OPA3
Lycopene_cycl
FAD_oxidored
Motif
Other DBs
NCBI-ProteinID:
AAW85316
UniProt:
Q5E6N0
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All DBs
Position
I:899425..901194
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AA seq
589 aa
AA seq
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MSSIPVREFDAVVIGAGGAGMRAALQISEQGLSCALLSKVFPTRSHTVSAQGGITVALGN
AHEDHWEQHMYDTVKGSDYIGDQDAIEYMCKNGPESVIELEKMGLPFSRFDNGTIYQRPF
GGQSKNFGGEQAARTAAAADRTGHALLHTLYQQNIKHKTTIFSEWYALDLVKNEDGAILG
CTALCMETGEVCYFKSKATILATGGAGRIYASTTNAHINTGDGVGMAIRAGVPMQDIEMW
QFHPTGIAGAGVLVTEGCRGEGGYLLNKDGERFMERYAPNAKDLAGRDVVARSMMVEIRE
GRGCDGPWGPHIKLKLDHLGKETLESRLPGVCELSRTFAHVDPVKEPIPVIPTCHYMMGG
VPTQVSGQAIKQDESGADVEVQGLFACGEIASVSVHGANRLGGNSLLDLVVFGRATGLHL
GETLKKQAEAKPATEEDIQRSLERYNRWENSTGGEDPAQIRKDLQQCMQNNFSVFREGDA
MAKGLEELKVIRERLNNAYLSDKSTEFNTQRIECLELENLMETAFATAVAANYRTESRGA
HARFDFPERDDANWLCHSIYNPETESMSKRNVNMEPVHREAFPPKARTY
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
gtgagtagtattcctgttagagaatttgatgccgttgtaatcggtgctggtggtgcaggt
atgcgagctgcgctgcaaatttcagaacaaggcctttcttgtgctttgctatcaaaagtt
tttccaactcgttctcacactgtatctgcccaaggtggtatcaccgttgctcttggtaat
gcgcatgaagatcactgggaacaacacatgtatgatacggtgaaaggctctgattatatc
ggtgaccaagatgctatcgaatatatgtgtaaaaatggtcctgagtcggttattgaatta
gagaaaatgggcttgcctttctcacgttttgataatggtacgatttatcaacgtccattt
ggcggtcaatctaagaactttggtggtgaacaagcagctcgtacagctgcagcggcagac
cgtactgggcatgcgcttcttcatacgctttaccaacaaaatattaagcataaaacgacg
attttttctgagtggtatgcgcttgatttagtaaaaaatgaagacggtgccattttagga
tgtactgctctttgtatggaaaccggtgaagtttgttactttaaatctaaagcaacaatt
ctagctactggtggtgctggacgtatttacgcttcaacaaccaatgcacatattaatact
ggtgatggtgttggtatggcgattcgagctggtgttccaatgcaagacattgaaatgtgg
cagttccacccaacaggtatcgcaggtgctggtgttcttgtaactgaaggctgtcgtggt
gaaggtggttatcttttaaataaagatggtgaacgcttcatggaacgttacgcaccaaat
gctaaagatttggccggtcgtgatgttgtagctcgttcaatgatggttgaaattcgtgaa
ggtcgtggttgcgatggtccttggggtccgcacattaaactgaaattggatcacttaggt
aaagaaacactagagtcacgtttacctggtgtgtgtgagttatctcgtacttttgctcat
gttgacccagtaaaagaacctattccagtgattcctacttgtcactacatgatgggcggc
gtaccaactcaggtttcaggtcaagctattaagcaagatgaaagtggtgccgatgttgaa
gttcaaggcctgtttgcttgtggtgaaattgcgtcagtttcagtacatggtgctaaccgt
ttaggtggcaactctttgcttgatttagtggtatttggtcgtgcaacagggcttcattta
ggtgaaacactgaaaaagcaagcagaagcaaaaccagcaactgaagaagatattcagcgt
tcactagagcgttataatcgttgggaaaatagcacgggtggtgaagacccagctcaaatc
cgtaaagacttacaacagtgtatgcaaaataacttctcggtattccgtgaaggtgatgca
atggcaaaaggtcttgaagagctaaaagtgatccgcgagcgtctaaacaatgcgtatcta
tctgataaatcgactgagtttaatactcagcgtattgaatgtttagagctagaaaacttg
atggaaacggcatttgcaaccgcagtagcagcaaattaccgtacagaaagtcgtggagca
cacgcacgctttgatttccctgagcgtgatgatgctaattggttatgccattcaatttac
aaccctgagacagaatcaatgtctaagcgtaatgtaaatatggaacctgttcaccgtgaa
gctttccctccgaaagctcgtacatattaa
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