Aliivibrio fischeri ES114: VF_2275
Help
Entry
VF_2275 CDS
T00236
Symbol
cytR
Name
(GenBank) DNA-binding transcriptional repressor
KO
K05499
LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
Organism
vfi
Aliivibrio fischeri ES114
Brite
KEGG Orthology (KO) [BR:
vfi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vfi03000
]
VF_2275 (cytR)
Transcription factors [BR:
vfi03000
]
Prokaryotic type
Helix-turn-helix
LacI family
VF_2275 (cytR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_AraC
AIRS
HTH_Tnp_ISL3
Motif
Other DBs
NCBI-ProteinID:
AAW86770
UniProt:
Q5E2H6
LinkDB
All DBs
Position
I:2557876..2558883
Genome browser
AA seq
335 aa
AA seq
DB search
MATMKDVALSAGVSTATVSRALMTPEKVSLSTRKRVEDAVLETGYSPTTLTRTLRRNESK
TIVTIVPDICDPYFSDIIRGIEDAAVENGYVILVGDSSQQKKREHSFVNLVYTKQVDGMV
LLGSDLPFNVSRQEQKNLPPLVMACEYAPELELPTVHIDNLTAAYEAVNYLTKLGHKNIA
ELSGPESSALCQFRHQGYQQALRRAGITMNASYVQYGDFTFEAGAKAITQLLSLSTPPTA
VFCHNDIMAIGAIQKAKQMGFRVPQDISIMGFDDIEFSQYCDPALTTISQPRYEIGRQSM
LMLLDLLKGHDVRSGSRLLESSLIVRESTASPKNK
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atggcgacaatgaaggacgttgctttatcggcaggagtgtcaacagcaacggtatcacga
gcactaatgacaccagaaaaagtatcattatccactcgtaagcgcgttgaagatgcagta
ttagaaacgggttactcaccaactacgttaactcgaacattacgacgcaatgagtcaaaa
accattgtgacgattgttcctgatatttgcgatccttactttagtgacattattcgcggt
attgaagatgctgccgttgaaaatggttatgtcattttagtaggcgacagcagtcagcaa
aaaaaacgtgaacactcctttgtaaaccttgtgtataccaagcaagttgatggcatggta
ttacttggttcagacctcccttttaacgttagtcgccaagaacaaaaaaatttaccgcct
cttgtaatggcgtgtgaatatgcaccagaattagaactaccaaccgttcatatcgataac
cttacagccgcctatgaagcagttaactacctaactaaactagggcataaaaacatcgca
gaattatctggtcctgagagctccgcgctctgtcagttcagacatcaaggttaccaacaa
gcacttcgccgtgcgggtatcaccatgaatgcctcttatgtgcaatatggtgatttcact
ttcgaagcaggggcaaaagcaataactcaacttctttctctttcaacaccaccgactgct
gtcttttgtcataacgatattatggcaatcggagcaattcaaaaagcgaaacaaatgggt
tttagagtgcctcaagacatttctatcatgggatttgatgatattgaattctctcaatat
tgtgatcctgcattaaccacgatttcccagcctcgttatgaaataggtcgtcaatctatg
ttaatgctacttgacctattaaaaggccatgatgttcgttctggttcacgattactcgaa
tcctcattgattgttagagagagtacggcgtccccaaaaaacaaataa
DBGET
integrated database retrieval system
