Vibrio fluvialis: AL536_12585
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Entry
AL536_12585 CDS
T04379
Name
(GenBank) ATP-dependent helicase
KO
K19789
DNA repair protein RadD
Organism
vfl
Vibrio fluvialis
Brite
KEGG Orthology (KO) [BR:
vfl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vfl03400
]
AL536_12585
DNA repair and recombination proteins [BR:
vfl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
AL536_12585
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
Helicase_C
DEAD
SWI2_SNF2
SLFN-g3_helicase
AAA_22
DZR
AAA
zf-tcix
AAA_16
zf-ribbon_3
Motif
Other DBs
NCBI-ProteinID:
AMF94315
UniProt:
A0A0X8LLS6
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All DBs
Position
2:complement(1050143..1051879)
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AA seq
578 aa
AA seq
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MYTLRPYQADSVKAVIHYFRQHSTPAVIVLPTGAGKSLVIAELARLAKGRVLVLAHVKEL
VEQNHAKYEGYGLKGAIFSAGLGRKETDQQVVFASVQSVVRNLDAFKNQFSLLVIDECHR
VPDDKSSSYQKVITHLLELNPGMKVLGLTATPYRLGMGWIYQYHTRGLVRSEEPRFFRDC
IFELPIRYLLDEGFLTPARLIDAPVLSYDFSQLKPANTGRYKESEMDLVIEQSKRATPQI
VQQIIQLAADKQGVMVFAATVRHAQEILGLLPQGESDIVIGDTPSPERDAIIQRFKQRDL
KFLVNVSVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRLSPGKTECLVLDYAGNTY
DLYQPEVGDPKPDSDSEIITIPCPACGFNNNFWGKLDNNGFLIEHYGRRCQGYFTDEETG
EREHCGYRFRAKYCGECGADNDIAARICHECDATLVDPDKKLKEALNLKDALVFECLDMD
LSVLKDDKGKSQLKVTYRGDNNAQVHEFWSLTTAKQKATFKERFVRPHLADKHRPFDEAS
PSKVVNNQHRFRPPQFVIARKVGRFWKMRDKIFEDELS
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgtacacacttcgtccttatcaagcagattccgtcaaagcggtcatccactacttccgc
caacactccactcctgccgtcatcgtgcttcccacaggcgcgggaaaaagtttggtgatc
gccgaattagcgcgcctggcaaaaggtcgagttcttgtgctggcacacgttaaagaactg
gtcgagcaaaaccacgcgaaatacgaaggttatggcctcaaaggtgccatcttctcggca
ggccttggccgcaaagaaaccgatcagcaagtggtgtttgcttcggtgcagtcggtcgtt
cgcaacctcgacgcattcaaaaaccagttttcattgctggtcatcgacgaatgtcaccgc
gtgccggatgacaaaagcagcagctatcaaaaagtcatcactcacctgctggaactcaat
ccgggaatgaaagtattaggtctgactgctacgccatatcgattgggaatgggttggatt
tatcagtatcacacccgcggtctggtgcgcagcgaagagccacgttttttccgcgattgt
atctttgaactaccgatccgctacctgttggatgaaggattccttactccagcgcgcctt
atcgacgcccccgtgctgagttacgacttttcgcagctcaagcctgccaacaccggccgc
tacaaagaatctgaaatggatttggtgattgaacaatcgaaacgcgcgacaccgcagatt
gttcagcagatcattcagctcgccgccgataaacagggcgtgatggtgtttgccgctacc
gtgcgccatgcacaggaaatattgggcttactgccacaaggcgaatccgacatcgtgatt
ggtgatacgccgtcaccggaacgtgacgccattattcagcgctttaagcagcgtgatttg
aagtttctggttaacgtatccgtactgaccactggttttgacgcaccgcacgtcgatctg
attgctattttgcgcccgacggaatcggtcagcttgtatcaacaaattgttggtcgtggc
ctgcgcctttctccggggaaaaccgaatgtttggtgctcgactatgcggggaacacctac
gatctgtatcagccggaggtaggcgaccccaagccggattccgacagcgaaatcatcacc
atcccctgcccggcctgcggctttaacaataacttttggggcaagctcgacaacaacggt
tttttgatagaacactacggccgccgctgtcagggctactttactgatgaagagactggc
gagcgcgaacactgtggttaccgctttcgcgccaaatactgcggcgagtgcggcgcagac
aacgacatcgccgcgcgaatttgtcatgaatgcgatgcgacgctggtcgacccggacaaa
aagctcaaagaagcactaaatctgaaagacgcgctggtgtttgagtgcctcgacatggat
ctgtccgtactgaaagatgacaaaggcaaatcccagctcaaagtgacctatcgcggtgac
aacaacgcacaggtgcacgagttctggtcgttgacgacagcgaaacaaaaagccacgttc
aaagagcgctttgtgcgccctcatctggccgacaaacatcgtccatttgatgaagcatcg
ccaagcaaagtggtgaataatcaacatcgcttccgcccgccccagttcgtaatagcccgt
aaagtcggtcgcttctggaaaatgcgcgacaaaatctttgaggatgaactgagttaa
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