Vibrio fluvialis: AL536_18295
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Entry
AL536_18295 CDS
T04379
Name
(GenBank) RNA polymerase sigma factor, RpoD/SigA family
KO
K03086
RNA polymerase primary sigma factor
Organism
vfl
Vibrio fluvialis
Pathway
vfl02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
vfl00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
AL536_18295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vfl03021
]
AL536_18295
Transcription machinery [BR:
vfl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AL536_18295
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r1_2
Npa1
Motif
Other DBs
NCBI-ProteinID:
AMF95364
UniProt:
A0A0X8LNT6
LinkDB
All DBs
Position
2:complement(2311003..2312130)
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AA seq
375 aa
AA seq
DB search
MKNEIVEKTIRDLVGDYERTGEKLSQEALTKIFVKRELSVDESSNVIEELMSQGIPVEWG
ELNDDDIELIDETVEAGSSSNFSFINRYNLLTKEDEVKLGRTIKLAMQVQDSHSCDDIIT
HKHLNIIVENGRKAKEAMVLANLRLVRKVVSYFSVSADLTVEDLFQEGIIGLSRAVEKFD
PDLGFKFSTYAVWWIKQAIERAIVDKGLTIRVPVHMHNKVQLFKKAVSALSAIKNGKSPK
PYEVAEELNWSVEEVHFCWAISAIQPSSLDELKHDGEYSLKDFLVADIPSPEDEINSQEL
TAGIKEHLAILKDREIEVLAHRFGLSDNQEERTLEYIGEMFGVTRERIRQIEAEALKKLR
RPSSASVLQENFLDD
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatgaaatagttgagaaaaccatacgagatttagttggtgactatgagcgaaca
ggagaaaagctatctcaagaagctctaacaaaaatatttgtaaagcgggaattgtcagtc
gatgaaagcagcaatgttatcgaagagcttatgtcacaaggaattcctgtcgaatggggg
gaattgaatgacgatgatattgagctcattgatgagacggttgaagcgggatcatcttca
aattttagctttataaatagatataacttattaacaaaagaagatgaggtgaagttaggc
cgtacaataaagttggctatgcaagttcaagatagtcattcttgtgatgatataattaca
cataagcacttaaacataattgttgaaaatggacgaaaggctaaggaagctatggtctta
gctaacttaaggctggttagaaaagtcgtatcatacttcagtgttagtgcagatcttacg
gtagaggacttattccaagaagggatcataggattaagtcgagctgttgaaaaatttgat
ccagatttggggtttaagttttctacatatgcggtgtggtggataaaacaagcaattgaa
agagcaattgttgataaaggactaacaattcgcgtgccggttcatatgcacaataaggtg
cagttatttaaaaaagccgtctctgcactttcagctataaaaaacggcaaatcaccaaaa
ccttatgaagttgcagaagaattaaattggagcgttgaagaggtgcacttttgttgggct
atttctgctatacaaccgagttccttagacgaattaaagcatgatggggaatattcactg
aaggattttttagttgcggatataccgtcccctgaagacgagattaattcacaggaatta
acagccggaataaaagagcacttagcgattttgaaagatagagaaatagaggtgcttgcg
cataggtttgggttgtccgacaaccaagaagaaaggacattggaatatataggagaaatg
ttcggagtaactagggagcggatacggcaaattgaagctgaggcattgaaaaagctaaga
cggccaagtagtgcttctgtcttacaagaaaactttttagacgattaa
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