Aliivibrio fischeri MJ11: VFMJ11_0160
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Entry
VFMJ11_0160 CDS
T00754
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
vfm
Aliivibrio fischeri MJ11
Pathway
vfm00521
Streptomycin biosynthesis
vfm00523
Polyketide sugar unit biosynthesis
vfm00541
O-Antigen nucleotide sugar biosynthesis
vfm01100
Metabolic pathways
vfm01110
Biosynthesis of secondary metabolites
vfm01250
Biosynthesis of nucleotide sugars
Module
vfm_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
vfm00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
VFMJ11_0160 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
VFMJ11_0160 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
VFMJ11_0160 (rfbC)
Enzymes [BR:
vfm01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
VFMJ11_0160 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Peptidase_M1
Motif
Other DBs
NCBI-ProteinID:
ACH64852
UniProt:
B5FFU4
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All DBs
Position
I:177893..178462
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AA seq
189 aa
AA seq
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MKVTDTRIPDVKIIEPSVFGDERGFFMETWNQKQFEELVTGKLTQFVQDNHSKSKKGILR
GLHYQTENTQGKLVRVISGEVFDVAVDIRKGSPTFGQWIGEYLSAENKRQLWIPEGFAHG
FYVTSEEAEFVYKCTDYYNPTAEVSIKWDDPTVNIEWPLKMLPSLSNKDKKAKMFNDVIK
EIYGDNNAN
NT seq
570 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtaaccgatacccgaatccctgatgtaaaaattatagaaccaagtgtgtttggt
gatgagcgaggtttctttatggaaacctggaatcaaaagcagtttgaagagttggtaaca
ggtaagctcacccaatttgtacaagataatcattccaaatctaagaaaggaattttacga
ggattgcattaccaaacagaaaacactcaggggaaattagttcgagtgatttctggtgaa
gtgtttgatgttgcagttgatattcgaaaaggctcaccgacgtttggtcaatggataggt
gaatatttatcggctgaaaacaagcgtcaactttggataccggaaggttttgcgcatggt
ttttatgtgacgagtgaagaagcagagttcgtatataagtgtacggattattacaatccg
acagctgaagtatcaattaagtgggatgaccctacagtaaatatagagtggccgttaaaa
atgcttccttctctgtcaaacaaagataagaaagcaaaaatgtttaatgacgttataaaa
gaaatttatggagataacaatgctaattga
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