Viruses: 17622795
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Entry
17622795 CDS
T40000
Symbol
SakoVgp1
Name
(RefSeq) Feline sakobuvirus A; polyprotein
Virus
1416021
Feline sakobuvirus A
Taxonomy
SSDB
Ortholog
Paralog
GFIT
Vog
Vog cluster
Motif
Pfam:
RdRP_1
RNA_helicase
Rhv
AAA_16
RdRP_4
DUF4538
nSTAND3
Calici_coat
AAA_22
AAA
Motif
Other DBs
NCBI-GeneID:
17622795
NCBI-ProteinID:
YP_008802588
RS:
NC_022802
UniProt:
U5XL86
LinkDB
All DBs
Position
NC_022802:592..7650
Genome browser
AA seq
2352 aa
AA seq
DB search
MPFSFSTPSPFPPEHTHLDHLLSGVSSNAQLKALRRIRHSPQCHCQEWRTPPTLPYNTFV
QDIFDEIAMSTLGAPGFHFSQRCLNYLSTLLPSPELEWDSSDVVYHGNSQTNIYGNNNHV
TTDVGANGNTPTASVSVGEGAVSSASDSTTHNPLKGGSSTAPKDKEPGKPDAKGNISTRR
YHAWWEPAAAKALDRALDHGVRAVDSVADGVASGIQAGVGKIKQRVAGVQDTKLIALPQN
DATMSGNTVLAAASGIHSGATYPPTPSVPLPTPDAPSCPGPSGDRFYPVDNLSWSEADPI
DSALSGPNACSITPLFPLSNSANWGDVNTGSIGYPLPASFVKAAPDCPWTAMYNMHAMWN
SGFHVVLTVNASQFHEGALVLYAFPENTYTNSNNPRCNFTVPYAVLNLTQTTQAELDLPY
IAPTPNSTTMGMHSPWYIVVGVLSPLLCPVGSSSTSVGVTLQVSPKNSSFHGLRHVQPQH
WKIRSVPGATTFGSMVAGQEVPLCGVVPTRPPVDYLPGEVKDLMEFAARPSPYSALPWTM
ADEPGTLIHSFPVGPLALAGTQTPLSFVVSLFSQWRGSVDINFMFIGCAQHYGRVLISFT
PYCQNPPTTIQEAQRGTYTVWDVNGNPELSFNVPYISTSYWRSTDLLSADKLSATLGYVS
VFVCNSLSGPGAAPISASLLSFICAGPDFEVRGQQNPALQLQAGDDPPVGGVTTGDPVPA
PVRDTFSSPTTGMSPDTSLVNYFSFYRNFMDVGVIKPQLYYQVSLDPIGFAPNFLSTLLH
VFTYFVADLRVNLEVEATQPTSLAVAFAPPGATLPVNWTSDSFRAFFHTSQPLEAGSNQV
CYSIPFFAPYSVLSTSFYGFGGFQGSEFGQLNANTFGTLILNPGAQVNVSVRLAFGDFRG
FIPGPVPATVPPSGSSTAVMVSSYRHTGVPQGIAVPRLPSVRPNALETKHRLAPLTPLRQ
SGDPLPICPYTFPEDSVYIIKQRRIGYIHWSIRRVTAGSCFIKPGVVHQISLVQHGVKAR
VSLEEPVGEIYREVPYYCFEMIARTLGSVVPYNYRDNCGEYITRFTGVSLPNTGLSLAAG
LTVAAGALCLAQTALEVKRQGLVDNARGVANTMDSAAGKLIAAANLMDVPGSADKIHESA
RLLANAAGDLSTRISEALSIFKQPPDSNPITRGVNNFLKWLTKCVGYMMVVFGSPTPLSI
GGLVLIILGDLAPSFPNVRNPFAAMALWICKKLGVSCTETEAEEMCVEGQAGVDDFNKWS
LAAKNADWLFDRLMSCLKQLLDWVGLRVREDPRSEIWANHDKVEKLYEDSISATTSAKPP
DSQAVQANLSIARALLETAGRASSSLHTSMLQRAISNYTSVLCNPQRTMSGTRPQPVVVY
IHGAPGVGKSLVASLLARTLAAKLGTGPDDFYAPSSADCQHYDGYTGQPVHYIDDIGQDV
EGRDWADFPQLVCSSPFVLPMASLEQKGTYYTSRVIIITSNFSGPNPRSVRCQPALERRL
TIRLVAELGPEPCSPAESVAPDGPSSKHFSSSTPLTRFESIKLSWDQKSLFTSPENPKSL
DELVDLVLELVARNSAISGDLNSLIKQGMTPVPEPQDSIQSPLVEAVSDNTPLSVLKAKF
SSFFQRPLFTTALFLSICSSVGVLIAAVLSIRKSLSETKEQPSEQGAYSANGQRPKPRRP
PLPKTHLKGPVVRQGVSPAVVKAMRNCAVIATEGVNGSDPHVVGGFFFFSRYFVTVSHIL
PASTVSIGGIEHRLEDLEPFVWNELLVLKVPGREHPDLRRYVDRPTSATTGHLIGCLAGG
PVLMRVDRLRPTPFKSPGFEARDLVYMYGGPTFPGLCGAPLFTDDSSGPALLSVHFAGVT
GYSGFGFPLAGLAEAILGHYATSQSIITPTPLPADGPVHVPRRSTLVPSPAFGAFPVLKE
PAPLTNKDPRLNPDVDLDVSVMAKHNKGDLTKPWPNLEAAVALYFSYLPDHFRTLSMHEA
INGTPGLDGMDLTQAAGYPWNTRGVSRRSLFIDTPGGYKPTPELEKSVDDCLDNPDYWYT
SFLKDELRPTEKVALGATRVVEAAPVQAIIAGRMLLGGVLEHMQSNPCQYGSAVGCDPDR
DWTRIYWDFNEFDEVWDMDYKCFDATLPTVAFELIANELAKRIGDPRVIPYLRSVSNSQH
VFGRQAYIMTGGNPSGCVGTSCWNSIINNCVLLSALMSHPDFDPDRYRILAYGDDVIYAH
EPTIHPSFVADFYRKHTSLVVTPASKAGSFPEHSSILTVTFLKRHFVPDETYPMYVHPVI
DPETYRNSVMWTRGGPFQCQLDSLSYLAHHSGPNNYQAWVDAVKAQCAANGVEVRLLPYA
YLQAAWLQTVMA
NT seq
7059 nt
NT seq
+upstream
nt +downstream
nt
atgcctttctctttctctactccttctcccttccctcctgagcacacccacctggaccac
ctcctctctggggtgtccagcaacgcccaactgaaagccctgcggaggatccggcattct
ccgcagtgtcactgtcaggagtggcgcaccccccctacccttccttacaacactttcgtt
caggacatttttgatgagatcgccatgagcacccttggtgctcctggctttcacttctct
cagaggtgcctgaactacctttccactcttcttccctcccctgaactcgagtgggactcc
tctgatgtggtgtaccatggtaactctcaaactaacatctatgggaacaacaaccatgtc
accactgatgtaggggcaaatggcaatactccaactgcctctgtgtcggtcggggagggg
gctgtctcctcagcctccgactcgactacacacaacccactcaaagggggctcttccacc
gctcccaaggataaggagcccggcaaacctgatgccaagggtaacatttccactagacgc
taccacgcctggtgggaacccgccgccgccaaggctctggaccgagccttggaccacgga
gtgcgggccgttgactcagtggctgatggtgttgcgtcaggtatacaggctggtgttggt
aagatcaaacaacgtgttgccggtgtgcaagacaccaagttgatcgcgttgcctcaaaac
gacgcgaccatgtccggtaacacggttcttgccgctgcctccggtatacactctggggcc
acctatccccccaccccttctgtccctcttcccactccagatgctccctcctgccccgga
ccttctggcgaccgtttctatccggtcgataatctctcttggtctgaggcagatcctatt
gattctgctctttctggtcctaatgcttgttctatcactcctctcttccctctttccaat
tctgccaactggggggacgtcaacactggcagtattggctatcccctccctgcttccttt
gtcaaggccgcccccgactgtccatggactgctatgtataacatgcacgccatgtggaat
tctggtttccacgtggtgctcactgttaatgcatcgcagttccatgagggagcccttgtt
ctctatgctttccctgaaaacacctacactaactccaacaacccacggtgcaatttcacg
gtgccgtacgcggtcctcaacctgacccaaaccacccaggctgagcttgacctaccgtac
attgcaccaacccccaactccaccaccatggggatgcactcaccgtggtacattgttgta
ggtgtcctttccccccttctatgtcctgttggctcttcctctacttctgtgggtgttaca
ctccaggtttcccccaagaactcctccttccatggtcttcgacacgtccaaccccaacac
tggaaaatccgttcggtgccaggggccactacctttggctccatggttgccggacaggaa
gttccactgtgtggggtggttcccacccgccccccggttgactatctaccgggtgaagtc
aaagacctgatggagttcgcggccaggccatcaccttactccgcgttaccgtggacgatg
gccgatgaacctggaactctcatccactctttcccagtgggtcctcttgcactcgctgga
acccaaacccctctctccttcgttgtctccctcttctcgcaatggcgcggtagtgtcgac
atcaacttcatgttcattggttgcgcacagcactatggacgtgtgttgatctcgttcaca
ccgtactgccagaaccctcctaccaccatccaggaggctcagcgaggcacttacacagtg
tgggatgtcaacggaaatcctgagctttctttcaatgttccttacatttctacctcctac
tggcgctccacggacttgctctctgctgataagctgtctgccacgctcggatatgtttcc
gtgtttgtgtgcaacagtttgagcggtcctggggcagcccccatctctgctagccttctt
tccttcatctgtgctggtcctgactttgaagtcaggggacaacaaaaccccgccctccag
ctccaggctggagatgatccacctgtcggtggggttactacgggagatcccgtaccagcc
cccgtccgggacaccttttcgtccccgactacgggcatgtctcctgacacttctcttgtc
aactacttttccttctataggaatttcatggatgttggcgtgatcaaaccccagctttac
tatcaggtctctcttgaccccattgggtttgctcccaacttcctttctaccctccttcat
gtcttcacttacttcgtggcagacttgcgggtcaacttggaagtggaggccacgcagccc
acttcattggctgtggcctttgcacccccaggtgccacccttcctgtcaactggacttca
gattcctttagggctttcttccacacttcacaacccctagaggctgggtccaaccaggtc
tgctactctatccctttcttcgctccttactctgtcctttccacttctttctatgggttt
ggtggtttccaggggtcagagtttggtcagctgaatgccaacacattcggtactctcatt
ctgaaccctggtgcacaggtcaatgtctcggtgcgtctggcctttggtgacttccgcggc
tttatccctgggccggtcccggccacggttccaccgtccgggtcctcgaccgctgtgatg
gtctcgtcttaccgtcacaccggggtgccccagggaattgccgttccaaggttaccaagt
gtccggcctaacgctctggagactaagcaccgcctcgccccactaacccctctccgccaa
tctggcgatcctcttcctatctgtccctatactttcccggaggactccgtttacatcatc
aagcagcggcgtatcggttacatccattggtctatccgaagggtgacagctggtagctgc
ttcatcaagcctggtgtcgttcatcagattagcttggtgcaacacggagtcaaagcccgg
gtctcccttgaggaaccggttggtgaaatttaccgcgaggtcccctattattgcttcgag
atgatcgcccgtacactcggtagcgtcgtcccgtacaactatagggataattgcggtgaa
tacatcaccaggttcactggggtctctctccctaacactggtctttccctggccgctggc
ctgacggtcgcagccggtgcgctttgcctcgcacaaacagccttagaggtgaagcgtcaa
ggcttggtggacaatgcccgcggggtcgcgaacaccatggactcggcagctggtaagctg
attgccgctgctaatctcatggacgttcctggctccgcggacaagatccacgagtcggca
cggcttcttgccaacgccgctggcgacctttccacccggatcagtgaagctctttccatc
ttcaaacaaccaccagacagtaacccaatcactcggggtgtcaacaacttcctcaagtgg
ttgactaagtgtgtgggttacatgatggtcgtctttggttctcctactcctctctctatt
ggtggtttggttctcatcattcttggtgatcttgctccttcctttcccaatgtccgcaac
ccttttgcggccatggcactgtggatctgtaagaaacttggtgtttcttgcactgaaaca
gaagctgaggagatgtgtgtggagggtcaggccggcgtggacgacttcaacaagtggtcc
cttgctgctaagaacgccgactggctctttgaccgtctcatgagttgcttgaagcagctt
ctcgattgggttggcctcagagttcgggaagatccccgttctgagatctgggccaaccac
gacaaggtcgagaagttgtatgaggattccatctcggcaactacctcagctaagccaccg
gactcccaggctgtccaggctaacctctctatagcccgggcgcttttggagaccgctggt
cgtgcctcttcttctcttcacacctctatgcttcaacgggccatttccaactacacctct
gtactctgcaaccctcagcgtaccatgtctggtacgcggccacagccagtggtcgtgtac
attcacggtgcacccggggttggcaagtctttggtagcctccctcctggcgcgcactctc
gctgctaagttggggactggtccggatgatttctatgctccttcttctgccgactgtcaa
cactacgatgggtacacagggcaacctgtgcactacatcgatgacatcggacaggatgtg
gagggccgcgattgggcagatttcccgcagttggtgtgttcgtcgccctttgtccttcca
atggcttcgttggaacagaagggtacgtactacacctctcgggtgatcattatcacgtcc
aacttcagcggtcctaacccgcgttctgtgcgttgtcagccggctcttgaacgtcgtctg
acgattcgactggtcgctgaactcggtcctgaaccttgttctccggcagagtccgtcgct
ccagacggcccctcctctaaacacttttcctcttccactcctttgacccgctttgagtct
atcaaactctcttgggatcagaagtctctctttacctctcctgaaaatcccaagtcgctt
gatgagctggtggatctggtgttagagttggtcgctcgcaattctgccatctcgggtgac
ctcaacagcctgatcaagcagggtatgacacctgtccctgaacctcaggactccattcag
tccccgcttgttgaggctgtgtctgacaacactccactctcagttctgaaggcgaaattt
tcttctttcttccaaagacctcttttcactactgctcttttcctctccatctgctcttct
gtgggagttctgatcgctgcggttctgtccatccgaaagtctctctcagagaccaaggag
caacccagcgagcagggcgcctactcggccaatggtcagaggcccaaaccacggcgacca
cccctgcccaagacccatctcaagggcccggtggttcgccagggggtttcccccgccgtc
gtgaaggcaatgcgcaattgcgctgtcatcgcgacggagggtgtgaatggttctgatccc
cacgttgtgggtggcttcttcttcttctctcgctactttgttactgtttcccacatcctt
cctgcttccacagtttcaataggtggtattgaacaccgcctagaggacctggaacccttt
gtgtggaacgagttgctcgtcctcaaagtccctgggcgtgagcatcctgacctccggcgc
tatgtagatcgcccgacatcggcgactacaggacacctcatcgggtgtcttgccgggggc
ccggttctcatgcgagtcgaccgcttgcggcccactcctttcaaatctccaggctttgag
gctcgggatctcgtctacatgtacgggggtccaaccttcccgggactgtgtggagcgcct
ctcttcactgatgattcttctggacctgccctactctctgtccactttgctggtgtcaca
ggttactccgggttcggctttcctttagccggactagcggaggcgatcctggggcactat
gccacttctcaatctatcatcacacctacccctcttcctgctgatggcccagttcatgtc
ccccgacggtccaccttggtcccttcaccggcttttggggcgtttccagtcctcaaggag
ccggctcctttgaccaacaaggacccacgcctgaaccctgatgtcgatctggacgtctcg
gtcatggcgaagcacaacaaaggggacttgactaaaccgtggcccaatcttgaggctgcg
gtggccctctacttttcttacctccctgaccatttccggacactttccatgcacgaggcc
atcaatggcacgcctggtctggacggaatggacctcacccaggccgcaggatacccatgg
aacacccgtggtgtttctcgcaggtctttgttcattgataccccagggggttacaaaccc
acacctgaactggagaagtctgtcgacgactgtctagacaacccggactactggtacacc
tctttcctgaaagacgagcttcgtccgacggagaaggtagcactgggagccactcgggtt
gttgaggcagctccagtccaggcgatcatcgctggccgcatgttgctcgggggtgttctc
gaacacatgcaatccaacccctgccaatatggtagcgcggttggttgcgaccccgatcgc
gactggaccaggatctactgggacttcaatgaatttgatgaggtttgggatatggactac
aagtgctttgatgcgacgttgccaactgttgctttcgagcttattgcgaacgagctcgct
aagcgcattggcgacccacgcgtcattccctacctgcgctctgtatccaactcccaacac
gtctttggccggcaagcttacatcatgactggtggtaacccctccggttgtgttggaacc
tcgtgctggaattccatcatcaacaactgtgtccttctttctgctctcatgtctcacccg
gactttgacccagacaggtatcgcatcttggcatatggtgacgatgtcatctatgcacac
gagccgaccatccatccatcttttgtggccgacttctacaggaagcataccagtttggtt
gtcacccctgcctccaaagccgggtctttccctgagcactcttccattctgactgtcact
ttcctcaaacgccacttcgtcccggacgagacgtaccctatgtacgtccatccagtcatc
gaccccgaaacctatcggaactcggtgatgtggacgcgtggcggtccctttcagtgtcag
cttgactctctttcttacttggcgcatcattccgggcctaacaactaccaggcctgggtt
gatgccgtcaaggcccagtgtgcagccaacggtgtggaggtgcgactccttccttatgcg
taccttcaggccgcttggctccaaacggtgatggcgtga
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