Viruses: 6966369 Help Entry 6966369           CDS       T40000                                  Symbol SVV_gp1 Name (RefSeq) Senecavirus A; polyprotein Virus 390157  Senecavirus A Taxonomy SSDB OrthologParalogGFITVogVog cluster Motif Pfam:  RdRP_1 Rhv RNA_helicase Peptidase_C3 RdRP_4 Calici_coat Peptidase_C3G VP4_2 Zeta_toxin Motif Other DBs NCBI-GeneID:  6966369 NCBI-ProteinID:  YP_002268402 RS:  NC_011349 UniProt:  Q155Z9 A0A1U9IRU2 Structure PDB LinkDB All DBs Position NC_011349:667..7212 Genome browser AA seq 2181 aa AA seqDB search MQNSHFSFDTASGTFEDVTGTKVKIVEYPRSVNNGVYDSSTHLEILNLQGEIEILRSFNE YQIRAAKQQLGLDIVYELQGNVQTTSKNDFDSRGNNGNMTFNYYANTYQNSVDFSTSSSA SGAGPGNSRGGLAGLLTNFSGILNPLGYLKDHNTEEMENSADRVTTQTAGNTAINTQSSL GVLCAYVEDPTKSDPPSSSTDQPTTTFTAIDRWYTGRLNSWTKAVKTFSFQAVPLPGAFL SRQGGLNGGAFTATLHRHFLMKCGWQVQVQCNLTQFHQGALLVAMVPETTLDVKPDGKAK SLQELNEEQWVEMSDDYRTGKNMPFQSLGTYYRPPNWTWGPNFINPYQVTVFPHQILNAR TSTSVDINVPYIGETPTQSSETQNSWTLLVMVLVPLDYKEGATTDPEITFSVRPTSPYFN GLRNRYTAGTDEEQGPIPTAPRENSLMFLSTLPDDTVPAYGNVRTPPVNYLPGEITDLLQ LARIPTLMAFERVPEPVPASDTYVPYVAVPTQFDDRPLISFPITLSDPVYQNTLVGAISS NFANYRGCIQITLTFCGPMMARGKFLLSYSPPNGTQPQTLSEAMQCTYSIWDIGLNSSWT FVVPYISPSDYRETRAITNSVYSADGWFSLHKLTKITLPPDCPQSPCILFFASAGEDYTL RLPVDCNPSYVFHSTDNAETGVIEAGNTDTDFSGELAAPGSNHTNVKFLFDRSRLLNVIK VLEKDAVFPRPFPTQEGAQQDDGYFCLLTPRPTVASRPATRFGLYANPSGSGVLANTSLD FNFYSLACFTYFRSDLEVTVVSLEPDLEFAVGWFPSGSEYQASSFVYDQLHVPFHFTGRT PRAFASKGGKVSFVLPWNSVSSVLPVRWGGASKLSSATRGLPAHADWGTIYAFVPRPNEK KSTAVKHVAVYIRYKNARAWCPSMLPFRSYKQKMLMQSGDIETNPGPASDNPILEFLEAE NDLVTLASLWKMVHSVQQTWRKYVKNDDFWPNLLSELVGEGSVALAATLSNQASVKALLG LHFLSRGLNYTDFYSLLIEKCSSFFTVEPPPPPAENLMTKPSVKSKFRKLFKMQGPMDKV KDWNQIAAGLKNFQFVRDLVKEVVDWLQAWINKEKASPVLQYQLEMKKLGPVALAHDAFM AGSGPPLSDDQIEYLQNLKSLALTLGKTNLAQSLTTMINAKQSSAQRVEPVVVVLRGKPG CGKSLASTLIAQAVSKRLYGSQSVYSLPPDPDFFDGYKGQFVTLMDDLGQNPDGQDFSTF CQMVSTAQFLPNMADLAEKGRPFTSNLIIATTNLPHFSPVTIADPSAVSRRINYDLTLEV SEAYKKHTRLNFDLAFRRTDAPPIYPFAAHVPFVDVAVRFKNGHQNFNLLELVDSICTDI RAKQQGARNMQTLVLQSPNENDDTPVDEALGRVLSPAAVDEALVDLTPEADPVGRLAILA KLGLALAAVTPGLIILAVGLYRYFSGSDADQEETESEGSVKAPRSENAYDGPKKNSKPPG ALSLMEMQQPNVDMGFEAAVAKKVVVPITFMVPNRPSGLTQSALLVTGRTFLINEHTWSN PSWTSFTIRGEVHTRDEPFQTVHFTHHGIPTDLMMVRLGPGNSFPNNLDKFGLDQMPARN SRVVGVSSSYGNFFFSGNFLGFVDSITSEQGTYARLFRYRVTTYKGWCGSALVCEAGGVR RIIGLHSAGAAGIGAGTYISKLGLIKALKHLGEPLATMQGLMTELEPGITVHVPRKSKLR KTTAHAVYKPEFEPAVLSKFDPRLNKDVDLDEVIWSKHTANVPYQPPLFYTYMSEYAHRV FSFLGKDNDILTVKEAILGIPGLDPMDPHTAPGLPYAINGLRRTDLVDFVNGTVDAALAV QIQKFLDGDYSDHVFQTFLKDEIRPSEKVRAGKTRIVDVPSLAHCIVGRMLLGRFAAKFQ SHPGFLLGSAIGSDPDVFWTVIGAQLEGRKNTYDVDYSAFDSSHGTGSFEALISHFFTVD NGFSPALGPYLRSLAVSVHAYGERRIKITGGLPSGCAATSLLNTVLNNVIIRTALALTYK EFEYDMVDIIAYGDDLLVGTDYDLDFNEVARRAAKLGYKMTPANKGSVFPPTSSLSDAVF LKRKFVQNNDGLYKPVMDLKNLEAMLSYFKPGTLLEKLQSVSMLAQHSGKEEYDRLMHPF ADYGAVPSHEYLQARWRALFD NT seq 6546 nt NT seq  +upstreamnt  +downstreamnt atgcagaactctcatttttctttcgatacagcctctggcacctttgaagatgtaaccgga acaaaagtcaagatcgttgaataccccagatcggtgaacaatggtgtttacgattcgtct actcatttggagatactgaacctacagggtgaaattgaaattttaaggtctttcaatgaa taccaaattcgcgccgccaaacaacaactcggactggacatcgtgtacgaactacagggt aatgttcagacaacgtcaaagaatgattttgattcccgtggcaataatggtaacatgacc ttcaattactacgcaaacacttatcagaattcagtagacttctcgacctcctcgtcggcg tcaggcgccggacccgggaactcccggggcggattagcgggtctcctcacaaatttcagt ggaatcttgaaccctcttggctacctcaaagatcacaacaccgaagaaatggaaaactct gctgatcgagtcacaacgcaaacggcgggcaacactgccataaacacgcaatcatcattg ggtgtgttgtgtgcctacgttgaagacccgaccaaatctgatcctccgtccagcagcaca gatcaacccaccaccactttcactgccatcgacaggtggtacactggacgtctcaattct tggacaaaagctgtaaaaaccttctcttttcaggccgtcccgcttcccggggcctttctg tctaggcagggaggcctcaacggaggggccttcacagctaccctacatagacactttttg atgaagtgcgggtggcaggtgcaggtccaatgtaatttgacacaattccaccaaggcgct cttcttgttgccatggttcctgaaaccacccttgatgtcaagcccgacggtaaggcaaag agcttacaggagctgaatgaagaacagtgggtggaaatgtctgacgattaccggaccggg aaaaacatgccttttcagtctcttggcacatactatcggccccctaactggacttggggt cccaatttcatcaacccctatcaagtaacggttttcccacaccaaattctgaacgcgaga acctctacctcggtagacataaacgtcccatacatcggggagacccccacgcaatcctca gagacacagaactcctggaccctcctcgttatggtgctcgttcccctagactataaggaa ggagccacaactgacccagaaattacattttctgtaaggcctacaagtccctacttcaat gggcttcgcaaccgctacacggccgggacggacgaagaacaggggcccattcctacggca cccagagaaaattcgcttatgtttctctcaaccctccctgacgacactgtccctgcttac gggaatgtgcgtacccctcctgtcaattacctccctggtgaaataaccgaccttttgcaa ctggcccgcatacccactctcatggcatttgagcgggtgcctgaacccgtgcctgcctca gacacatatgtgccctacgttgccgttcccacccagttcgatgacaggcctctcatctcc ttcccgatcaccctttcagatcccgtctatcagaacaccctggttggcgccatcagttca aatttcgccaattaccgtgggtgtatccaaatcactctgacattttgtggacccatgatg gcgagagggaaattcctgctctcgtattctcccccaaatggaacgcaaccacagactctt tccgaagctatgcagtgcacatactctatttgggacataggcttgaactctagttggacc ttcgtcgtcccctacatctcgcccagtgactaccgtgaaactcgagccattaccaactcg gtttactccgctgatggttggtttagcctgcacaagttgaccaaaattactctaccacct gactgtccgcaaagtccctgcattctctttttcgcttctgctggtgaggattacactctc cgtctccccgttgattgtaatccttcctatgtgttccactccaccgacaacgccgagacc ggggttattgaggcgggtaacactgacaccgatttctctggtgaactggcggctcctggc tctaaccacactaatgtcaagttcctgtttgatcgatctcgattattgaatgtaatcaag gtactggagaaggacgccgttttcccccgccctttccctacacaagaaggtgcgcagcag gatgatggttacttttgtcttctgaccccccgcccaacagtcgcttcccgacccgccact cgtttcggcctgtacgccaatccgtccggcagtggtgttcttgctaacacttcactggac ttcaatttttatagcttggcctgtttcacttactttagatcggaccttgaggttacggtg gtctcactagagccggatctggaatttgctgtagggtggtttccttctggcagtgaatac caggcttccagctttgtctacgaccagctgcatgtgcccttccactttactgggcgcact ccccgcgctttcgctagcaagggtgggaaggtatctttcgtgctcccttggaactctgtc tcgtctgtgctccccgtgcgctgggggggggcttccaagctctcttctgctacgcggggt ctaccggcgcatgctgattgggggactatttacgcctttgtcccccgtcctaatgagaag aaaagcaccgctgtaaaacacgtggccgtgtacattcggtacaagaacgcacgtgcctgg tgccccagcatgcttccctttcgcagctacaagcagaagatgctgatgcaatctggcgat atcgagaccaatcctggtcctgcttctgacaacccaattttggagtttcttgaagcagaa aatgatctagtcactctggcctctctctggaagatggtgcactctgttcaacagacctgg agaaagtatgtgaagaacgatgatttttggcccaatttactcagcgagctagtgggggaa ggctctgtcgccttggccgccacgctatccaaccaagcttcagtaaaggctcttttgggc ctgcactttctctctcgggggctcaattacactgacttttactctttactgatagagaaa tgctctagtttctttaccgtagaaccacctcctccaccagctgaaaacctgatgaccaag ccctcagtgaagtcgaaattccgaaaactgtttaagatgcaaggacccatggacaaagtc aaagactggaaccaaatagctgccggcttgaagaattttcaatttgttcgtgacctagtc aaagaggtggtcgattggctgcaggcctggatcaacaaagagaaagccagccctgtcctc cagtaccagttggagatgaagaagctcgggcctgtggccttggctcatgacgctttcatg gctggttccgggccccctcttagcgacgaccagattgaatacctccagaacctcaaatct cttgccctaacactggggaagactaatttggcccaaagtctcaccactatgatcaatgcc aaacaaagttcagcccaacgagttgaacccgttgtggtggtccttagaggcaagccggga tgcggcaagagcttggcctctacgttgattgcccaggctgtgtccaagcgcctctatggc tcccaaagtgtatattctcttcccccagatccagatttcttcgatggatacaaaggacag ttcgtgaccttgatggatgatttgggacaaaacccggatggacaagatttctccaccttt tgtcagatggtgtcgaccgcccaatttctccccaacatggcggaccttgcagagaaaggg cgtccctttacctccaatctcatcattgcaactacaaatctcccccacttcagtcctgtc accattgctgatccttctgcagtctctcgccgtatcaactacgatctgactctagaagta tctgaggcctacaagaaacacacacggctgaattttgacttggctttcaggcgcacagac gccccccccatttatccttttgctgcccatgtgccctttgtggacgtagctgtgcgcttc aaaaatggtcaccagaattttaatctcctagagttggtcgattccatttgtacagacatt cgagccaagcaacaaggtgcccgaaacatgcagactctggttctacagagccccaacgag aatgatgacacccccgtcgacgaggcgttgggtagagttctctcccccgctgcggtcgat gaggcgcttgtcgacctcactccagaggccgacccggttggccgtttggctattcttgcc aagctaggtcttgccctagctgcggtcacccctggtctgataatcttggcagtgggactc tacaggtacttctctggctctgatgcagaccaagaagaaacagaaagtgagggatctgtc aaggcacccaggagcgaaaatgcttatgacggcccgaagaaaaactctaagccccctgga gcactctctctcatggaaatgcaacagcccaacgtggacatgggctttgaggctgcggtc gctaagaaagtggtcgtccccattaccttcatggttcccaacagaccttctgggcttaca cagtccgctcttctggtgaccggccggaccttcctaatcaatgaacatacatggtccaat ccctcctggaccagcttcacaatccgcggtgaggtacacactcgtgatgagcccttccaa acggttcatttcactcaccacggtattcccacagatctgatgatggtacgtctcggaccg ggcaattctttccctaacaatctagacaagtttggacttgaccagatgccggcacgcaac tcccgtgtggttggcgtttcgtccagttacggaaacttcttcttctctggaaatttcctc ggatttgttgattccatcacctctgaacaaggaacttacgcaagactctttaggtacagg gtgacgacctacaaaggatggtgcggctcggccctggtctgtgaggccggtggcgtccga cgcatcattggcctgcattctgctggcgccgccggtatcggcgccgggacctatatctca aaattaggactaatcaaagccctgaaacacctcggtgaacctttggccacaatgcaagga ctgatgactgaattagagcctggaatcaccgtacatgtaccccggaaatccaaattgaga aagacgaccgcacacgcggtgtacaaaccggagtttgagcctgctgtgttgtcaaaattt gatcccagactgaacaaggatgttgacttggatgaagtaatttggtctaaacacactgcc aatgtcccttaccaacctcctttgttctacacatacatgtcagagtacgctcatcgagtc ttctccttcttggggaaagacaatgacattctgaccgtcaaagaagcaattctgggcatc cccggactagaccccatggatccccacacagctccgggtctgccttacgccatcaacggc cttcgacgtactgatctcgtcgattttgtgaacggtacagtagatgcggcgctggctgta caaatccagaaattcttagacggtgactactctgaccatgtcttccaaacttttctgaaa gatgagatcagaccctcagagaaagtccgagcgggaaaaacccgcattgttgatgtgccc tccctggcgcattgcattgtgggcagaatgttgcttgggcgctttgctgccaagtttcaa tcccatcctggctttctcctcggctctgctatcgggtctgaccctgatgttttctggacc gtcataggggctcaactcgaggggagaaagaacacgtatgacgtggactacagtgccttt gactcttcacacggcactggctccttcgaggctctcatctctcactttttcaccgtggac aatggttttagccctgcgctgggaccgtatctcagatccctggctgtctcggtgcacgct tacggcgagcgtcgcatcaagattaccggtggcctcccctccggttgtgccgcgaccagc ctgctgaacacagtgctcaacaatgtgatcatcaggactgctctggcattgacttacaag gaatttgaatatgacatggttgatatcatcgcctacggtgacgaccttctggttggcacg gattacgatctggacttcaatgaggtggcacgacgcgctgccaagttggggtataagatg actcctgccaacaagggttctgtcttccctccgacttcctctctttccgatgctgttttt ctaaagcgcaaattcgtccaaaacaacgacggcttatacaaaccagttatggatttaaag aatttggaagccatgctctcctacttcaaaccaggaacactactcgagaagctgcaatct gtttctatgttggctcaacattctggaaaagaagaatatgatagattgatgcaccccttc gctgactacggtgccgtaccgagtcacgagtacctgcaggcaagatggagggccttgttc gactga

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